RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 RERGQ96A58 199 aaPredicted RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 CIDECQ96AQ7 238 aaPredicted RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 CLDN23Q96B33 292 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 TM4SF19Q96DZ7 209 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 NEURL3Q96EH8 262 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 CNBD2Q96M20 576 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 AMDHD1Q96NU7 426 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 TEFMQ96QE5 360 aaKnown RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 OR2A14Q96R47 310 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 OR2A5Q96R48 311 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 BBS4Q96RK4 519 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 SERINC2Q96SA4 455 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 NRTNQ99748 197 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 RBM4BQ9BQ04 359 aaKnown RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 C17orf62Q9BQA9 187 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 SLC35A5Q9BS91 424 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 DOHHQ9BU89 302 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 RBM4Q9BWF3 364 aaKnown RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 SORBS1Q9BX66 1292 aaKnown RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 ZNF717Q9BY31 904 aaPredicted RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 ANKRD60Q9BZ19 345 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 ABCG4Q9H172 646 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 CHST8Q9H2A9 424 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 KLHL31Q9H511 634 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 EPS8L2Q9H6S3 715 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 UNKLQ9H9P5 680 aaKnown RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 UCK1Q9HA47 277 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 CLK4Q9HAZ1 481 aaKnown RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 C3orf14Q9HBI5 128 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 GALNT9Q9HCQ5 603 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 TM9SF3Q9HD45 589 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 LTB4R2Q9NPC1 389 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 A4GALTQ9NPC4 353 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 LHX9Q9NQ69 397 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 SLC35C2Q9NQQ7 365 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 GIMAP4Q9NUV9 329 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 FBXO34Q9NWN3 711 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 HRASLS2Q9NWW9 162 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 SMPD3Q9NY59 655 aaPredicted RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 UBAP1Q9NZ09 502 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 USE1Q9NZ43 259 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 DLGAP2Q9P1A6 1054 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 IFT80Q9P2H3 777 aaPredicted RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 PHF11Q9UIL8 331 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 CA14Q9ULX7 337 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 FAM32AQ9Y421 112 aaKnown RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 NEUROG3Q9Y4Z2 214 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 ASB4Q9Y574 426 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 SNX8Q9Y5X2 465 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 ZNF780BQ9Y6R6 833 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 ZNF638Q14966 1978 aaKnown RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 CHD5Q8TDI0 1954 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 SETXQ7Z333 2677 aaKnown RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 ZNF292O60281 2723 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 CACNA1GO43497 2377 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 ZDBF2Q9HCK1 2354 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 IGHV1OR15-9A0A0B4J2B8 117 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 GSAPA4D1B5 854 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 OR2A25A4D2G3 310 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 DPPA5A6NC42 116 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 WIPF3A6NGB9 483 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 MYO1GB0I1T2 1018 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 M0QX08 132 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 PDLIM1O00151 329 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 UPK1AO00322 258 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 EI24O14681 340 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 SRPX2O60687 465 aaPredicted RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 UGT2B11O75310 529 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 RFPL3O75679 317 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 PDE9AO76083 593 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 SOX30O94993 753 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 H6PDO95479 791 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 CLPTM1O96005 669 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 GASTP01350 101 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 MT-ND1P03886 318 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 CSF2P04141 144 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 ALPLP05186 524 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 TFPTP0C1Z6 253 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 THRBP10828 461 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 ETFAP13804 333 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 UGT2B7P16662 529 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 CDH2P19022 906 aaPredicted RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 POLR2CP19387 275 aaPredicted RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 EFNA1P20827 205 aaPredicted RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 MYF6P23409 242 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 PEBP1P30086 187 aaKnown RBP4.17□□□□□ -1.74
SRP54-212ENST00000556992 NTSP30990 170 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 CAPGP40121 348 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 DCTP40126 519 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 CXCL12P48061 93 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 MVDP53602 400 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 RAD23AP54725 363 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 ARSFP54793 590 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 NR1H2P55055 460 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 SMIM11AP58511 58 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 DSTNP60981 165 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 RAB8AP61006 207 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 TUBA4AP68366 448 aa4.17□□□□□ -1.74
SRP54-212ENST00000556992 ADARB1P78563 741 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms