RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 ZNF675Q8TD23 568 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 CNRIP1Q96F85 164 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-221ENST00000556571 ZNF681Q96N22 645 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 FMO2Q99518 471 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 DSN1Q9H410 356 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 ELOVL6Q9H5J4 265 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 FANCFQ9NPI8 374 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 PLSCR4Q9NRQ2 329 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 ZDHHC18Q9NUE0 388 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 PPP4R1LQ9P1A2 415 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 CPSF2Q9P2I0 782 aaKnown RBP10.69□□□□□ -0.7
ACTN1-221ENST00000556571 ZNF337Q9Y3M9 751 aa10.69□□□□□ -0.7
ACTN1-221ENST00000556571 HEATR5AQ86XA9 2040 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 RAI1Q7Z5J4 1906 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-221ENST00000556571 ANK3Q12955 4377 aaKnown RBP10.68□□□□□ -0.7
ACTN1-221ENST00000556571 UQCRHLA0A096LP55 91 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 B4DXG7 233 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 RNF223E7ERA6 249 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 H0YC42 278 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 SEC14L5O43304 696 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 TLX2O43763 284 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-221ENST00000556571 KLHL2O95198 593 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 FCGR2AP12318 317 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 ALDH9A1P49189 494 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 TPD52P55327 224 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-221ENST00000556571 CORO7P57737 925 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 TRA2BP62995 288 aaKnown RBP10.68□□□□□ -0.7
ACTN1-221ENST00000556571 GALNT1Q10472 559 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-221ENST00000556571 NAB1Q13506 487 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 VEZF1Q14119 521 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 GANABQ14697 944 aaKnown RBP10.68□□□□□ -0.7
ACTN1-221ENST00000556571 ERCC6LQ2NKX8 1250 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 ZNF628Q5EBL2 1059 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 SGO1Q5FBB7 561 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 PHC2Q8IXK0 858 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 IFT20Q8IY31 132 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 CCDC116Q8IYX3 515 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 OR2M3Q8NG83 312 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 FBF1Q8TES7 1133 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 TMEM158Q8WZ71 300 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 GFM2Q969S9 779 aaKnown RBP10.68□□□□□ -0.7
ACTN1-221ENST00000556571 TRMT61AQ96FX7 289 aaKnown RBP10.68□□□□□ -0.7
ACTN1-221ENST00000556571 VSTM2LQ96N03 204 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 TMEM204Q9BSN7 226 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 REG4Q9BYZ8 158 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 STMN4Q9H169 189 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-221ENST00000556571 PTGES2Q9H7Z7 377 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 PFDN4Q9NQP4 134 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 SDHAF3Q9NRP4 125 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 NMRK1Q9NWW6 199 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 DMGDHQ9UI17 866 aaKnown RBP10.68□□□□□ -0.7
ACTN1-221ENST00000556571 UTS2RQ9UKP6 389 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 SLC12A4Q9UP95 1085 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 EMC9Q9Y3B6 208 aa10.68□□□□□ -0.7
ACTN1-221ENST00000556571 OR2M5A3KFT3 312 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 PLAUP00749 431 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 EVI2BP34910 448 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 IDUAP35475 653 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 CLDN20P56880 219 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 RPS4XP62701 263 aaKnown RBP10.67□□□□□ -0.7
ACTN1-221ENST00000556571 TRAF3Q13114 568 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 SGCBQ16585 318 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 GLYR1Q49A26 553 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-221ENST00000556571 GGTA1PQ4G0N0 100 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 MROH9Q5TGP6 573 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 FAM180BQ6P0A1 224 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 NPSR1Q6W5P4 371 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 STAC2Q6ZMT1 411 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 HIPK1Q86Z02 1210 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 SAMD14Q8IZD0 417 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-221ENST00000556571 METTL25Q8N6Q8 603 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 PTGR2Q8N8N7 351 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-221ENST00000556571 MAPK1IP1LQ8NDC0 245 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 OR6K3Q8NGY3 331 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 EFHD2Q96C19 240 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-221ENST00000556571 PLPPR2Q96GM1 343 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 GPR78Q96P69 363 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 ANKRA2Q9H9E1 313 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 BRF2Q9HAW0 419 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 MED11Q9P086 117 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 LAMP3Q9UQV4 416 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 OR10H1Q9Y4A9 318 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 AP4B1Q9Y6B7 739 aa10.67□□□□□ -0.7
ACTN1-221ENST00000556571 A0A096LPK6 155 aa10.66□□□□□ -0.7
ACTN1-221ENST00000556571 C17orf51A8MQB3 221 aa10.66□□□□□ -0.7
ACTN1-221ENST00000556571 H3BML4 177 aa10.66□□□□□ -0.7
ACTN1-221ENST00000556571 STX16-NPEPL1H3BU86 382 aa10.66□□□□□ -0.7
ACTN1-221ENST00000556571 STX16O14662 325 aa10.66□□□□□ -0.7
ACTN1-221ENST00000556571 SCO2O43819 266 aa10.66□□□□□ -0.7
ACTN1-221ENST00000556571 FADS1O60427 444 aa10.66□□□□□ -0.7
ACTN1-221ENST00000556571 PLOD3O60568 738 aa10.66□□□□□ -0.7
ACTN1-221ENST00000556571 AQP8O94778 261 aa10.66□□□□□ -0.7
ACTN1-221ENST00000556571 ESRRBO95718 433 aa10.66□□□□□ -0.7
ACTN1-221ENST00000556571 PLGP00747 810 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-221ENST00000556571 IL11P20809 199 aa10.66□□□□□ -0.7
ACTN1-221ENST00000556571 CTBP2P56545 445 aa10.66□□□□□ -0.7
ACTN1-221ENST00000556571 UAP1Q16222 522 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-221ENST00000556571 ADAM5Q6NVV9 412 aa10.66□□□□□ -0.7
ACTN1-221ENST00000556571 WFDC8Q8IUA0 241 aa10.66□□□□□ -0.7
ACTN1-221ENST00000556571 SLC44A2Q8IWA5 706 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms