RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 KLHL15Q96M94 604 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 LYSMD1Q96S90 227 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 VRK1Q99986 396 aaPredicted RBP8.07□□□□□ -1.12
MARK3-210ENST00000556463 PAPOLGQ9BWT3 736 aaKnown RBP8.07□□□□□ -1.12
MARK3-210ENST00000556463 SUCNR1Q9BXA5 334 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 SLC28A3Q9HAS3 691 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 PHF11Q9UIL8 331 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 DNAH12Q6ZR08 3092 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 TMEM129A0AVI4 362 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 EIF3GO75821 320 aaKnown RBP eCLIP8.07□□□□□ -1.12
MARK3-210ENST00000556463 KLK3P07288 261 aaPredicted RBP8.07□□□□□ -1.12
MARK3-210ENST00000556463 THEGLP0DJG4 465 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 CCND3P30281 292 aaPredicted RBP8.07□□□□□ -1.12
MARK3-210ENST00000556463 SDC2P34741 201 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 ATP6V1E1P36543 226 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 ASMTP46597 345 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 SSTP61278 116 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 SEMG2Q02383 582 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 MPEG1Q2M385 716 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 ZNF385BQ569K4 471 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 C10orf120Q5SQS8 335 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 SFRP5Q5T4F7 317 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 CNIH2Q6PI25 160 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 NXPE1Q8N323 547 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 OR8J1Q8NGP2 316 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 THAP6Q8TBB0 222 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 C3orf49Q96BT1 292 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 BBS4Q96RK4 519 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 FAM83CQ9BQN1 747 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 ZNF649Q9BS31 505 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 ZNF436Q9C0F3 470 aaPredicted RBP8.07□□□□□ -1.12
MARK3-210ENST00000556463 CHRDQ9H2X0 955 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 TBC1D17Q9HA65 648 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 FGF20Q9NP95 211 aaPredicted RBP8.07□□□□□ -1.12
MARK3-210ENST00000556463 PTTG3PQ9NZH4 202 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 CTSFQ9UBX1 484 aa8.07□□□□□ -1.12
MARK3-210ENST00000556463 ARID1BQ8NFD5 2236 aaPredicted RBP8.06□□□□□ -1.12
MARK3-210ENST00000556463 H3BN98 237 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 GTPBP1O00178 669 aaKnown RBP8.06□□□□□ -1.12
MARK3-210ENST00000556463 SH3BGRLO75368 114 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 NCR1O76036 304 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 GADD45GO95257 159 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 CPSF4O95639 269 aaKnown RBP8.06□□□□□ -1.12
MARK3-210ENST00000556463 OPN1SWP03999 348 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 ARAFP10398 606 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 ETFAP13804 333 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 BTCP35070 178 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 ETV5P41161 510 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 TSPAN7P41732 249 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 CTBP2P56545 445 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 RPS24P62847 133 aaKnown RBP8.06□□□□□ -1.12
MARK3-210ENST00000556463 SCARB2Q14108 478 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 OPCMLQ14982 345 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 P2RY14Q15391 338 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 CPTPQ5TA50 214 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 GPR139Q6DWJ6 353 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 RAB11FIP2Q7L804 512 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 PRICKLE2Q7Z3G6 844 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 GPAT4Q86UL3 456 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 PDZD3Q86UT5 571 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 CFAP206Q8IYR0 622 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 SPAG16Q8N0X2 631 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 ZSCAN1Q8NBB4 408 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 SVIPQ8NHG7 77 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 RNASE11Q8TAA1 199 aaKnown RBP8.06□□□□□ -1.12
MARK3-210ENST00000556463 SFT2D1Q8WV19 159 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 HGDQ93099 445 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 UCN3Q969E3 161 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 FBXO32Q969P5 355 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 ALG14Q96F25 216 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 SCMH1Q96GD3 660 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 SHDQ96IW2 340 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 BTBD1Q9H0C5 482 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 NT5DC2Q9H857 520 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 TINAGQ9UJW2 476 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 NUP210Q8TEM1 1887 aaPredicted RBP8.06□□□□□ -1.12
MARK3-210ENST00000556463 SYNDIG1LA6NDD5 238 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 ZNF705EA8MWA4 302 aaPredicted RBP8.06□□□□□ -1.12
MARK3-210ENST00000556463 UPK3BL1B0FP48 263 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 KRBOX1C9JBD0 128 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 UPK3BL2E5RIL1 263 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 WRBO00258 174 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 EEF1E1O43324 174 aaKnown RBP8.06□□□□□ -1.12
MARK3-210ENST00000556463 SOD1P00441 154 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 KLKB1P03952 638 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 LPLP06858 475 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 ZNF35P13682 527 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 CXCL3P19876 107 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 HBA1P69905 142 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 BCL2L1Q07817 233 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 SLC3A1Q07837 685 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 ACSM1Q08AH1 577 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 TSC22D1Q15714 1073 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 ZNF630Q2M218 657 aaPredicted RBP8.06□□□□□ -1.12
MARK3-210ENST00000556463 KLHL22Q53GT1 634 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 C1orf53Q5VUE5 145 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 ETFRF1Q6IPR1 90 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 OR11H4Q8NGC9 324 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 OR52P1PQ8NH57 321 aa8.06□□□□□ -1.12
MARK3-210ENST00000556463 AP3S1Q92572 193 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms