RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 AIMP2Q13155 320 aaKnown RBP8.53□□□□□ -1.04
ACTN1-218ENST00000556343 DUSP8Q13202 625 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 TGIF1Q15583 401 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 GPR68Q15743 365 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.53□□□□□ -1.04
ACTN1-218ENST00000556343 FLYWCH1Q4VC44 716 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 CT45A2Q5DJT8 189 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 BROXQ5VW32 411 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 AAGABQ6PD74 315 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 FKBP9P1Q75LS8 142 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 CBLL1Q75N03 491 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 EIF3MQ7L2H7 374 aaKnown RBP8.53□□□□□ -1.04
ACTN1-218ENST00000556343 WDR53Q7Z5U6 358 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-218ENST00000556343 ARMC8Q8IUR7 673 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 C9orf40Q8IXQ3 194 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 BCORP1Q8N888 145 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 ZNF321PQ8N8H1 164 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 ANKFN1Q8N957 763 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 SIMC1Q8NDZ2 872 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 FAM110BQ8TC76 370 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 PIK3R3Q92569 461 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 PROX1Q92786 737 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 ADIPOR1Q96A54 375 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 TMCO6Q96DC7 493 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 OTUB1Q96FW1 271 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-218ENST00000556343 RMND5BQ96G75 393 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-218ENST00000556343 PYURFQ96I23 114 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 ZNF354BQ96LW1 612 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 COL21A1Q96P44 957 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 CCNL2Q96S94 520 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-218ENST00000556343 TREX2Q9BQ50 279 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-218ENST00000556343 SAP130Q9H0E3 1048 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 SERHL2Q9H4I8 314 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 DENND2DQ9H6A0 471 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-218ENST00000556343 CCDC86Q9H6F5 360 aaKnown RBP8.53□□□□□ -1.04
ACTN1-218ENST00000556343 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.53□□□□□ -1.04
ACTN1-218ENST00000556343 MYOTQ9UBF9 498 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 IL17BQ9UHF5 180 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 ANAPC2Q9UJX6 822 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 YARS2Q9Y2Z4 477 aaKnown RBP8.53□□□□□ -1.04
ACTN1-218ENST00000556343 KCNE3Q9Y6H6 103 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 AHCTF1Q8WYP5 2266 aa8.53□□□□□ -1.04
ACTN1-218ENST00000556343 DMXL1Q9Y485 3027 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 DHRS12A0PJE2 317 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 GXYLT2A0PJZ3 443 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 A8MUI8 341 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 SCDO00767 359 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 TP53I11O14683 189 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 KLK10O43240 276 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 SORBS2O94875 1100 aaKnown RBP8.52□□□□□ -1.05
ACTN1-218ENST00000556343 ZNF682O95780 498 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 C8BP07358 591 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 THBS1P07996 1170 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 FCGR1AP12314 374 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 IL7RP16871 459 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 ITGA2P17301 1181 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 AQP1P29972 269 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 IFNA8P32881 189 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 SSR4P51571 173 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 PNLIPRP2P54317 469 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 PCBP3P57721 371 aaKnown RBP8.52□□□□□ -1.05
ACTN1-218ENST00000556343 CHRNEQ04844 493 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 CLN3Q13286 438 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 IL10RAQ13651 578 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 ATP1A4Q13733 1029 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 MEP1AQ16819 746 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 LIN52Q52LA3 116 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 IFI44LQ53G44 452 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 EIPR1Q53HC9 387 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 CYBRD1Q53TN4 286 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 ZNF311Q5JNZ3 666 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 FAM69BQ5VUD6 431 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 AP1ARQ63HQ0 302 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 FIGNL1Q6PIW4 674 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 OPN5Q6U736 354 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 NPSR1Q6W5P4 371 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 LRRC69Q6ZNQ3 347 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 NUP54Q7Z3B4 507 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 RPS19BP1Q86WX3 136 aaKnown RBP8.52□□□□□ -1.05
ACTN1-218ENST00000556343 GPALPP1Q8IXQ4 340 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 C10orf111Q8N326 155 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 OR52P1PQ8NH57 321 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 SNIP1Q8TAD8 396 aaKnown RBP8.52□□□□□ -1.05
ACTN1-218ENST00000556343 ADAMTS17Q8TE56 1095 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 WDR60Q8WVS4 1066 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 ASB15Q8WXK1 588 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 DIO2Q92813 273 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 TMBIM1Q969X1 311 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 OMA1Q96E52 524 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 TPD52L3Q96J77 140 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 DOHHQ9BU89 302 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 PINK1Q9BXM7 581 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 ZNF350Q9GZX5 532 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 LHPPQ9H008 270 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 NXF5Q9H1B4 397 aaKnown RBP8.52□□□□□ -1.05
ACTN1-218ENST00000556343 RASSF4Q9H2L5 321 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 MAGIXQ9H6Y5 334 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 UBQLN4Q9NRR5 601 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 GMPR2Q9P2T1 348 aaKnown RBP8.52□□□□□ -1.05
ACTN1-218ENST00000556343 DKK4Q9UBT3 224 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms