RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 HOXB13Q92826 284 aaPredicted RBP11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 SFXN2Q96NB2 322 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 AMDHD1Q96NU7 426 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 DACH2Q96NX9 599 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 RHOXF2Q9BQY4 288 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 LMF2Q9BU23 707 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 TRMOQ9BU70 441 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 Q9N2J8 555 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 DDX18Q9NVP1 670 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 FAM120CQ9NX05 1096 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 MID2Q9UJV3 735 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 DKKL1Q9UK85 242 aa11.51□□□□□ -0.57
HNRNPC-221ENST00000555883 ITPR3Q14573 2671 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 B4DXG7 233 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 CRCPO75575 148 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 IL33O95760 270 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 JUNP05412 331 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 NEFHP12036 1026 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 PEPDP12955 493 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 DIO3P55073 304 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 EEFSECP57772 596 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 B3GALT5-AS1P59052 145 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 BTKQ06187 659 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 ZNF155Q12901 538 aaPredicted RBP11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 SNTB1Q13884 538 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 ZNHIT3Q15649 155 aaPredicted RBP11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 DECR1Q16698 335 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 GLYR1Q49A26 553 aaPredicted RBP11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 LIPMQ5VYY2 423 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 OR2A2Q6IF42 318 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 TMEM107Q6UX40 140 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 PAMR1Q6UXH9 720 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 OR4K17Q8NGC6 315 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 OR4N2Q8NGD1 307 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 NRGNQ92686 78 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 EFHD2Q96C19 240 aaPredicted RBP11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 ELP4Q96EB1 424 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 FCRL1Q96LA6 429 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 CCT7Q99832 543 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 TMUB1Q9BVT8 246 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 RBM24Q9BX46 236 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 IQCGQ9H095 443 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 GLIPR2Q9H4G4 154 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 C3orf14Q9HBI5 128 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 CCM2LQ9NUG4 571 aaPredicted RBP11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 MKS1Q9NXB0 559 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 PPP4R1LQ9P1A2 415 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 PACSIN3Q9UKS6 424 aa11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 ZNF469Q96JG9 3925 aaPredicted RBP11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 MAP1AP78559 2803 aaPredicted RBP11.5□□□□□ -0.57
HNRNPC-221ENST00000555883 IGLV3-32A0A0A0MS00 114 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 A8MXE2 369 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 SLC28A1O00337 649 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 MSTNO14793 375 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 TNFSF13O75888 250 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 CPA3P15088 417 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 DNASE1P24855 282 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 MAP3K8P41279 467 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 CLK3P49761 638 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 SRYQ05066 204 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 SLC18A2Q05940 514 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 FOXF2Q12947 444 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 PRSS53Q2L4Q9 553 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 VPS26BQ4G0F5 336 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 OR5M10Q6IEU7 315 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 GRAMD2AQ8IUY3 354 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 OR2M3Q8NG83 312 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 SMPDL3BQ92485 455 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 PTGES2Q9H7Z7 377 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 TNFRSF12AQ9NP84 129 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 C1orf109Q9NX04 203 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 GALNT8Q9NY28 637 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 NTMQ9P121 344 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 TMED5Q9Y3A6 229 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 POLR3HQ9Y535 204 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 MTORP42345 2549 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 SETD2Q9BYW2 2564 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 VPS13CQ709C8 3753 aa11.49□□□□□ -0.57
HNRNPC-221ENST00000555883 C2CD3Q4AC94 2353 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 A0A1W2PNV4 684 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 COPEO14579 308 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 RGS14O43566 566 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 SEC22BO75396 215 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 NME6O75414 186 aaPredicted RBP11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 TNFRSF21O75509 655 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 RAF1P04049 648 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 SHBGP04278 402 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 NGFRP08138 427 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 KRT4P19013 534 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 LCN1P31025 176 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 FRKP42685 505 aaPredicted RBP11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 STARP49675 285 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 AGFG1P52594 562 aaKnown RBP11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 PRR5P85299 388 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 PDE7AQ13946 482 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 FGFBP1Q14512 234 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 TGIF2LYQ8IUE0 185 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 MEIOBQ8N635 442 aa11.48□□□□□ -0.57
HNRNPC-221ENST00000555883 CDC26Q8NHZ8 85 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms