RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 GAB1Q13480 694 aa12.54□□□□□ -0.4
PCNX4-209ENST00000555569 DECR1Q16698 335 aa12.54□□□□□ -0.4
PCNX4-209ENST00000555569 FBXL19-AS1Q494R0 122 aa12.54□□□□□ -0.4
PCNX4-209ENST00000555569 AAGABQ6PD74 315 aa12.54□□□□□ -0.4
PCNX4-209ENST00000555569 POMZP3Q6PJE2 187 aa12.54□□□□□ -0.4
PCNX4-209ENST00000555569 ZNF551Q7Z340 670 aaPredicted RBP12.54□□□□□ -0.4
PCNX4-209ENST00000555569 C9orf106Q8NAJ2 232 aa12.54□□□□□ -0.4
PCNX4-209ENST00000555569 RNASE6Q93091 150 aaKnown RBP12.54□□□□□ -0.4
PCNX4-209ENST00000555569 ZNF764Q96H86 408 aaPredicted RBP12.54□□□□□ -0.4
PCNX4-209ENST00000555569 SFXN2Q96NB2 322 aa12.54□□□□□ -0.4
PCNX4-209ENST00000555569 TSSK3Q96PN8 268 aa12.54□□□□□ -0.4
PCNX4-209ENST00000555569 SH3GL2Q99962 352 aa12.54□□□□□ -0.4
PCNX4-209ENST00000555569 TUBA1CQ9BQE3 449 aa12.54□□□□□ -0.4
PCNX4-209ENST00000555569 LMF2Q9BU23 707 aaKnown RBP12.54□□□□□ -0.4
PCNX4-209ENST00000555569 MECRQ9BV79 373 aa12.54□□□□□ -0.4
PCNX4-209ENST00000555569 ROPN1BQ9BZX4 212 aaPredicted RBP12.54□□□□□ -0.4
PCNX4-209ENST00000555569 REEP4Q9H6H4 257 aa12.54□□□□□ -0.4
PCNX4-209ENST00000555569 ROPN1Q9HAT0 212 aaPredicted RBP12.54□□□□□ -0.4
PCNX4-209ENST00000555569 PPP4R1LQ9P1A2 415 aa12.54□□□□□ -0.4
PCNX4-209ENST00000555569 SLC17A7Q9P2U7 560 aa12.54□□□□□ -0.4
PCNX4-209ENST00000555569 ABCG2Q9UNQ0 655 aa12.54□□□□□ -0.4
PCNX4-209ENST00000555569 DNAJC15Q9Y5T4 150 aa12.54□□□□□ -0.4
PCNX4-209ENST00000555569 NUP214P35658 2090 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-209ENST00000555569 TTC36A6NLP5 189 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 C17orf51A8MQB3 221 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 LSM1O15116 133 aaKnown RBP12.53□□□□□ -0.4
PCNX4-209ENST00000555569 AKAP10O43572 662 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 ZIC3O60481 467 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 TBX19O60806 448 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 IL33O95760 270 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 FGF4P08620 206 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 TMIGD3P0DMS9 266 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-209ENST00000555569 TCEA1P23193 301 aaKnown RBP12.53□□□□□ -0.4
PCNX4-209ENST00000555569 CHMP24386 653 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 DPP4P27487 766 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 KIR2DL3P43628 341 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 STARP49675 285 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 PSMD4P55036 377 aaKnown RBP12.53□□□□□ -0.4
PCNX4-209ENST00000555569 SNTB1Q13884 538 aaKnown RBP12.53□□□□□ -0.4
PCNX4-209ENST00000555569 RFTN2Q52LD8 501 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-209ENST00000555569 ZNF385BQ569K4 471 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 ARL13AQ5H913 290 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-209ENST00000555569 ANKRD26P1Q6NSI1 321 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 DDIASQ8IXT1 998 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 ZZZ3Q8IYH5 903 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 FADS6Q8N9I5 356 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 ZFP28Q8NHY6 868 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 AENQ8WTP8 325 aaKnown RBP12.53□□□□□ -0.4
PCNX4-209ENST00000555569 TWIST2Q8WVJ9 160 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 CIDECQ96AQ7 238 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-209ENST00000555569 PPCDCQ96CD2 204 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 DSN1Q9H410 356 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 C3orf14Q9HBI5 128 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 EML4Q9HC35 981 aaKnown RBP12.53□□□□□ -0.4
PCNX4-209ENST00000555569 FLRT3Q9NZU0 649 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 FOXD3Q9UJU5 478 aaPredicted RBP12.53□□□□□ -0.4
PCNX4-209ENST00000555569 MRTO4Q9UKD2 239 aaKnown RBP12.53□□□□□ -0.4
PCNX4-209ENST00000555569 TMED5Q9Y3A6 229 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 TRAF6Q9Y4K3 522 aa12.53□□□□□ -0.4
PCNX4-209ENST00000555569 MED13LQ71F56 2210 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 CLCA1A8K7I4 914 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 TMEM233B4DJY2 109 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 B4DXG7 233 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 FADS1O60427 444 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 IL18BPO95998 194 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 PRPS2P11908 318 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 POU3F2P20265 443 aaPredicted RBP12.52□□□□□ -0.41
PCNX4-209ENST00000555569 GABRA3P34903 492 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 GPC1P35052 558 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 OPRM1P35372 400 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 ASMTP46597 345 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 RFX3P48380 749 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 CLK3P49761 638 aaKnown RBP12.52□□□□□ -0.41
PCNX4-209ENST00000555569 LHX2P50458 406 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 AGFG1P52594 562 aaKnown RBP12.52□□□□□ -0.41
PCNX4-209ENST00000555569 DGKQP52824 942 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 MANFP55145 182 aaKnown RBP12.52□□□□□ -0.41
PCNX4-209ENST00000555569 DSCR4P56555 118 aaPredicted RBP12.52□□□□□ -0.41
PCNX4-209ENST00000555569 PDE7AQ13946 482 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 GALNTL6Q49A17 601 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 EMBQ6PCB8 327 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 ADGRE4PQ86SQ3 457 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 OR2M3Q8NG83 312 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 CLHC1Q8NHS4 586 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 TCP10LQ8TDR4 215 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 ZBED6CLQ96FA7 236 aaPredicted RBP12.52□□□□□ -0.41
PCNX4-209ENST00000555569 ZFP3Q96NJ6 502 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 UCN2Q96RP3 112 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 TM9SF2Q99805 663 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 EQTNQ9NQ60 294 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 SDHAF3Q9NRP4 125 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 FAM120CQ9NX05 1096 aaKnown RBP12.52□□□□□ -0.41
PCNX4-209ENST00000555569 SH3BP4Q9P0V3 963 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 BAIAP2L1Q9UHR4 511 aa12.52□□□□□ -0.41
PCNX4-209ENST00000555569 RPH3AQ9Y2J0 694 aaPredicted RBP12.52□□□□□ -0.41
PCNX4-209ENST00000555569 ABCA4P78363 2273 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 GXYLT2A0PJZ3 443 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 EEF1E1-BLOC1S5C9J1V9 151 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 PIP5K1BO14986 540 aa12.51□□□□□ -0.41
PCNX4-209ENST00000555569 EEF1E1O43324 174 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms