RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 RPH3AQ9Y2J0 694 aaPredicted RBP22.23■■□□□ 1.15
PRKCH-216ENST00000555542 PIP5K1BO14986 540 aa22.22■■□□□ 1.15
PRKCH-216ENST00000555542 LSM1O15116 133 aaKnown RBP22.22■■□□□ 1.15
PRKCH-216ENST00000555542 DPP4P27487 766 aa22.22■■□□□ 1.15
PRKCH-216ENST00000555542 ASCL1P50553 236 aa22.22■■□□□ 1.15
PRKCH-216ENST00000555542 DGKQP52824 942 aa22.22■■□□□ 1.15
PRKCH-216ENST00000555542 PRKAG1P54619 331 aa22.22■■□□□ 1.15
PRKCH-216ENST00000555542 MANFP55145 182 aaKnown RBP22.22■■□□□ 1.15
PRKCH-216ENST00000555542 STX5Q13190 355 aa22.22■■□□□ 1.15
PRKCH-216ENST00000555542 GAB1Q13480 694 aa22.22■■□□□ 1.15
PRKCH-216ENST00000555542 CDH24Q86UP0 819 aa22.22■■□□□ 1.15
PRKCH-216ENST00000555542 ZPLD1Q8TCW7 415 aa22.22■■□□□ 1.15
PRKCH-216ENST00000555542 ZBED6CLQ96FA7 236 aaPredicted RBP22.22■■□□□ 1.15
PRKCH-216ENST00000555542 CALHM2Q9HA72 323 aa22.22■■□□□ 1.15
PRKCH-216ENST00000555542 SDHAF3Q9NRP4 125 aa22.22■■□□□ 1.15
PRKCH-216ENST00000555542 ZNF629Q9UEG4 869 aaPredicted RBP22.22■■□□□ 1.15
PRKCH-216ENST00000555542 KCNH1O95259 989 aa22.21■■□□□ 1.15
PRKCH-216ENST00000555542 PSMG1O95456 288 aa22.21■■□□□ 1.15
PRKCH-216ENST00000555542 FGF4P08620 206 aa22.21■■□□□ 1.15
PRKCH-216ENST00000555542 PRPS2P11908 318 aa22.21■■□□□ 1.15
PRKCH-216ENST00000555542 CPN1P15169 458 aa22.21■■□□□ 1.15
PRKCH-216ENST00000555542 DDX5P17844 614 aaKnown RBP22.21■■□□□ 1.15
PRKCH-216ENST00000555542 GABRA3P34903 492 aa22.21■■□□□ 1.15
PRKCH-216ENST00000555542 ASMTP46597 345 aa22.21■■□□□ 1.15
PRKCH-216ENST00000555542 DLX5P56178 289 aa22.21■■□□□ 1.15
PRKCH-216ENST00000555542 SNTB1Q13884 538 aaKnown RBP22.21■■□□□ 1.15
PRKCH-216ENST00000555542 WDR93Q6P2C0 686 aa22.21■■□□□ 1.15
PRKCH-216ENST00000555542 CAVIN3Q969G5 261 aa22.21■■□□□ 1.15
PRKCH-216ENST00000555542 FCRL1Q96LA6 429 aa22.21■■□□□ 1.15
PRKCH-216ENST00000555542 TUBA1CQ9BQE3 449 aa22.21■■□□□ 1.15
PRKCH-216ENST00000555542 LMF2Q9BU23 707 aaKnown RBP22.21■■□□□ 1.15
PRKCH-216ENST00000555542 ABCG2Q9UNQ0 655 aa22.21■■□□□ 1.15
PRKCH-216ENST00000555542 L3MBTL1Q9Y468 752 aa22.21■■□□□ 1.15
PRKCH-216ENST00000555542 KIAA1549Q9HCM3 1950 aa22.21■■□□□ 1.15
PRKCH-216ENST00000555542 MBD3L4A6NDZ8 208 aaPredicted RBP22.2■■□□□ 1.14
PRKCH-216ENST00000555542 MBD3L3A6NE82 208 aaPredicted RBP22.2■■□□□ 1.14
PRKCH-216ENST00000555542 MBD3L5A6NJ08 208 aaPredicted RBP22.2■■□□□ 1.14
PRKCH-216ENST00000555542 TMEM114B3SHH9 223 aa22.2■■□□□ 1.14
PRKCH-216ENST00000555542 EEF1E1-BLOC1S5C9J1V9 151 aa22.2■■□□□ 1.14
PRKCH-216ENST00000555542 EEF1E1O43324 174 aaKnown RBP22.2■■□□□ 1.14
PRKCH-216ENST00000555542 MAPK1P28482 360 aa22.2■■□□□ 1.14
PRKCH-216ENST00000555542 HPCAL1P37235 193 aa22.2■■□□□ 1.14
PRKCH-216ENST00000555542 PEX19P40855 299 aa22.2■■□□□ 1.14
PRKCH-216ENST00000555542 STARP49675 285 aa22.2■■□□□ 1.14
PRKCH-216ENST00000555542 AGFG1P52594 562 aaKnown RBP22.2■■□□□ 1.14
PRKCH-216ENST00000555542 ZNF136P52737 540 aa22.2■■□□□ 1.14
PRKCH-216ENST00000555542 VPS26BQ4G0F5 336 aa22.2■■□□□ 1.14
PRKCH-216ENST00000555542 ZNF385BQ569K4 471 aa22.2■■□□□ 1.14
PRKCH-216ENST00000555542 MBD3L2Q8NHZ7 208 aaPredicted RBP22.2■■□□□ 1.14
PRKCH-216ENST00000555542 PPP1R14CQ8TAE6 165 aa22.2■■□□□ 1.14
PRKCH-216ENST00000555542 GPR151Q8TDV0 419 aa22.2■■□□□ 1.14
PRKCH-216ENST00000555542 ZNF764Q96H86 408 aaPredicted RBP22.2■■□□□ 1.14
PRKCH-216ENST00000555542 PPP3R2Q96LZ3 170 aa22.2■■□□□ 1.14
PRKCH-216ENST00000555542 DSN1Q9H410 356 aa22.2■■□□□ 1.14
PRKCH-216ENST00000555542 FLRT3Q9NZU0 649 aa22.2■■□□□ 1.14
PRKCH-216ENST00000555542 TTC36A6NLP5 189 aa22.19■■□□□ 1.14
PRKCH-216ENST00000555542 IL33O95760 270 aa22.19■■□□□ 1.14
PRKCH-216ENST00000555542 IFI6P09912 130 aa22.19■■□□□ 1.14
PRKCH-216ENST00000555542 CTSSP25774 331 aa22.19■■□□□ 1.14
PRKCH-216ENST00000555542 SERPINB5P36952 375 aa22.19■■□□□ 1.14
PRKCH-216ENST00000555542 KIR2DL3P43628 341 aa22.19■■□□□ 1.14
PRKCH-216ENST00000555542 GAS1P54826 345 aa22.19■■□□□ 1.14
PRKCH-216ENST00000555542 GFRA1P56159 465 aa22.19■■□□□ 1.14
PRKCH-216ENST00000555542 DSCR4P56555 118 aaPredicted RBP22.19■■□□□ 1.14
PRKCH-216ENST00000555542 R3HCC1LQ7Z5L2 792 aaKnown RBP22.19■■□□□ 1.14
PRKCH-216ENST00000555542 ZZZ3Q8IYH5 903 aa22.19■■□□□ 1.14
PRKCH-216ENST00000555542 C9orf106Q8NAJ2 232 aa22.19■■□□□ 1.14
PRKCH-216ENST00000555542 NUP43Q8NFH3 380 aa22.19■■□□□ 1.14
PRKCH-216ENST00000555542 CEP70Q8NHQ1 597 aa22.19■■□□□ 1.14
PRKCH-216ENST00000555542 RNASE6Q93091 150 aaKnown RBP22.19■■□□□ 1.14
PRKCH-216ENST00000555542 RMND5BQ96G75 393 aaPredicted RBP22.19■■□□□ 1.14
PRKCH-216ENST00000555542 TBL1XR1Q9BZK7 514 aa22.19■■□□□ 1.14
PRKCH-216ENST00000555542 FAM120CQ9NX05 1096 aaKnown RBP22.19■■□□□ 1.14
PRKCH-216ENST00000555542 C17orf51A8MQB3 221 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 SYT5O00445 386 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 TBX19O60806 448 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 PEX11AO75192 247 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 SKAP2O75563 359 aaPredicted RBP22.18■■□□□ 1.14
PRKCH-216ENST00000555542 TMIGD3P0DMS9 266 aaPredicted RBP22.18■■□□□ 1.14
PRKCH-216ENST00000555542 BCKDHAP12694 445 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 OPRM1P35372 400 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 KRT71Q3SY84 523 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 ATP6AP1LQ52LC2 224 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 RAET1LQ5VY80 246 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 CHMP1BQ7LBR1 199 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 RNF138Q8WVD3 245 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 PIK3R3Q92569 461 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 SLC9A6Q92581 669 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 TM9SF2Q99805 663 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 PTGES2Q9H7Z7 377 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 MED11Q9P086 117 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 GIMAP2Q9UG22 337 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 FOXD3Q9UJU5 478 aaPredicted RBP22.18■■□□□ 1.14
PRKCH-216ENST00000555542 MRPS18CQ9Y3D5 142 aaKnown RBP22.18■■□□□ 1.14
PRKCH-216ENST00000555542 MED12Q93074 2177 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 CSMD2Q7Z408 3487 aa22.18■■□□□ 1.14
PRKCH-216ENST00000555542 DCHS2Q6V1P9 2916 aa22.17■■□□□ 1.14
PRKCH-216ENST00000555542 GXYLT2A0PJZ3 443 aa22.17■■□□□ 1.14
PRKCH-216ENST00000555542 CLCA1A8K7I4 914 aa22.17■■□□□ 1.14
PRKCH-216ENST00000555542 FADS1O60427 444 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms