RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 PRG3Q9Y2Y8 225 aaPredicted RBP1.99□□□□□ -2.09
SNX6-204ENST00000555541 L3MBTL1Q9Y468 752 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 WSB1Q9Y6I7 421 aa1.99□□□□□ -2.09
SNX6-204ENST00000555541 IGKV2-28A0A075B6P5 120 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 C5orf51A6NDU8 294 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 DHRS7CA6NNS2 312 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 USP27XA6NNY8 438 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 ERVV-1B6SEH8 477 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 H0Y626 953 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 RAMP1O60894 148 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 TBL1XO60907 577 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 IGKV2D-28P01615 120 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 PGK2P07205 417 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 ZNF44P15621 663 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 RPS6P62753 249 aaKnown RBP1.98□□□□□ -2.09
SNX6-204ENST00000555541 ZNF786Q8N393 782 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 ARIH2OSQ8N7S6 290 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 ZNF540Q8NDQ6 660 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 ANKRD49Q8WVL7 239 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 BCL2L2Q92843 193 aaPredicted RBP1.98□□□□□ -2.09
SNX6-204ENST00000555541 FGGYQ96C11 551 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 HAVCR1Q96D42 359 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 VPS39Q96JC1 886 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 NOL4LQ96MY1 436 aaPredicted RBP1.98□□□□□ -2.09
SNX6-204ENST00000555541 DEFB118Q96PH6 123 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 NRTNQ99748 197 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 ADPGKQ9BRR6 497 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 TRPV6Q9H1D0 765 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 GRPEL1Q9HAV7 217 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 DCAF13Q9NV06 445 aaKnown RBP1.98□□□□□ -2.09
SNX6-204ENST00000555541 AKAP7Q9P0M2 348 aaPredicted RBP1.98□□□□□ -2.09
SNX6-204ENST00000555541 TRPC4Q9UBN4 977 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 STX8Q9UNK0 236 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 ANKRD30BQ9BXX2 1392 aa1.98□□□□□ -2.09
SNX6-204ENST00000555541 ZNF320A2RRD8 509 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 SMIM30A4D0T7 59 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 TMEM110-MUSTN1A8MSY1 372 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 E9PLD3 99 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 K7ENP7 123 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 BBOX1O75936 387 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 CABYRO75952 493 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 AKAP3O75969 853 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 HSP90AA1P07900 732 aaKnown RBP1.97□□□□□ -2.09
SNX6-204ENST00000555541 HSP90AB1P08238 724 aaKnown RBP1.97□□□□□ -2.09
SNX6-204ENST00000555541 IGFBP1P08833 259 aaPredicted RBP1.97□□□□□ -2.09
SNX6-204ENST00000555541 HOXD10P28358 340 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 HTR1FP30939 366 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 RFC2P35250 354 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 NUP107P57740 925 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 NLRP11P59045 1033 aaKnown RBP1.97□□□□□ -2.09
SNX6-204ENST00000555541 NOP14P78316 857 aaKnown RBP1.97□□□□□ -2.09
SNX6-204ENST00000555541 CCZ1BP86790 482 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 CCZ1P86791 482 aaPredicted RBP1.97□□□□□ -2.09
SNX6-204ENST00000555541 IL9RQ01113 521 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 KCNJ11Q14654 390 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 C16orf72Q14CZ0 275 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 TMEM110Q86TL2 294 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 ZNF589Q86UQ0 364 aaPredicted RBP1.97□□□□□ -2.09
SNX6-204ENST00000555541 ZNF100Q8IYN0 542 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 ZBTB44Q8NCP5 570 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 C7orf33Q8WU49 177 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 ARNTL2Q8WYA1 636 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 DCUN1D4Q92564 292 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 TAF4BQ92750 862 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 PSMG2Q969U7 264 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 MCHR2Q969V1 340 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 TMEM101Q96IK0 257 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 FAM213AQ9BRX8 229 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 CARD6Q9BX69 1037 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 MRPL9Q9BYD2 267 aaKnown RBP1.97□□□□□ -2.09
SNX6-204ENST00000555541 ZWILCHQ9H900 591 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 PNO1Q9NRX1 252 aaKnown RBP1.97□□□□□ -2.09
SNX6-204ENST00000555541 FAM114A2Q9NRY5 505 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 PIGVQ9NUD9 493 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 LCMT1Q9UIC8 334 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 FBXW2Q9UKT8 454 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 NAP1L2Q9ULW6 460 aaPredicted RBP1.97□□□□□ -2.09
SNX6-204ENST00000555541 PTCH1Q13635 1447 aa1.97□□□□□ -2.09
SNX6-204ENST00000555541 MTCL1Q9Y4B5 1905 aaKnown RBP1.97□□□□□ -2.09
SNX6-204ENST00000555541 GRIN2DO15399 1336 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 LRCOL1A6NCL2 159 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 ANKRD63C9JTQ0 380 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 ZNF263O14978 683 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 ATP6V1G1O75348 118 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 ZNF324O75467 553 aaPredicted RBP1.96□□□□□ -2.1
SNX6-204ENST00000555541 STK17BO94768 372 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 SUPT7LO94864 414 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 SYNGR4O95473 234 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 AXLP30530 894 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 PFN3P60673 137 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 TIMM10P62072 90 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 PDE7AQ13946 482 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 GPNMBQ14956 572 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 GLRA4Q5JXX5 417 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 HACD2Q6Y1H2 254 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 BNIPLQ7Z465 357 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 ALLCQ8N6M5 410 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 MARCH1Q8TCQ1 289 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 MYDGFQ969H8 173 aa1.96□□□□□ -2.1
SNX6-204ENST00000555541 TMEM245Q9H330 911 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms