RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 MCHR1Q99705 422 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 PIGUQ9H490 435 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 PALMDQ9NP74 551 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 LOC100506127A0A0U1RQW1 187 aa22.64■■□□□ 1.21
TMEM260-207ENST00000555497 AGR2O95994 175 aa22.64■■□□□ 1.21
TMEM260-207ENST00000555497 RPLP0P05388 317 aaKnown RBP22.64■■□□□ 1.21
TMEM260-207ENST00000555497 BMP4P12644 408 aa22.64■■□□□ 1.21
TMEM260-207ENST00000555497 OMPP47874 163 aa22.64■■□□□ 1.21
TMEM260-207ENST00000555497 MAZP56270 477 aaKnown RBP22.64■■□□□ 1.21
TMEM260-207ENST00000555497 ST3GAL3Q11203 375 aa22.64■■□□□ 1.21
TMEM260-207ENST00000555497 ZNF846Q147U1 533 aa22.64■■□□□ 1.21
TMEM260-207ENST00000555497 PRICKLE4Q2TBC4 344 aa22.64■■□□□ 1.21
TMEM260-207ENST00000555497 ZNF730Q6ZMV8 503 aa22.64■■□□□ 1.21
TMEM260-207ENST00000555497 ZNF687Q8N1G0 1237 aa22.64■■□□□ 1.21
TMEM260-207ENST00000555497 ZNF655Q8N720 491 aaPredicted RBP22.64■■□□□ 1.21
TMEM260-207ENST00000555497 GNPDA2Q8TDQ7 276 aa22.64■■□□□ 1.21
TMEM260-207ENST00000555497 ABTB1Q969K4 478 aaPredicted RBP22.64■■□□□ 1.21
TMEM260-207ENST00000555497 ANKRD9Q96BM1 317 aaPredicted RBP22.64■■□□□ 1.21
TMEM260-207ENST00000555497 CENPOQ9BU64 300 aa22.64■■□□□ 1.21
TMEM260-207ENST00000555497 FBXO8Q9NRD0 319 aa22.64■■□□□ 1.21
TMEM260-207ENST00000555497 KLHL28Q9NXS3 571 aa22.64■■□□□ 1.21
TMEM260-207ENST00000555497 MAT2BQ9NZL9 334 aa22.64■■□□□ 1.21
TMEM260-207ENST00000555497 LSM2Q9Y333 95 aaKnown RBP22.64■■□□□ 1.21
TMEM260-207ENST00000555497 BMP8BP34820 402 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 SERPINB10P48595 397 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 ITGADQ13349 1161 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 TSTQ16762 297 aaKnown RBP22.63■■□□□ 1.21
TMEM260-207ENST00000555497 SYT14P1Q58G82 188 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 DGAT2L6Q6ZPD8 337 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 GDF7Q7Z4P5 450 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 PARGQ86W56 976 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 ARHGEF39Q8N4T4 335 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 SEMA6CQ9H3T2 930 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 KCNE5Q9UJ90 142 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 RDH16O75452 317 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 GSTM3P21266 225 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 RNF144AP50876 292 aaPredicted RBP22.63■■□□□ 1.21
TMEM260-207ENST00000555497 EEF1A1P68104 462 aaKnown RBP22.63■■□□□ 1.21
TMEM260-207ENST00000555497 SRSF5Q13243 272 aaKnown RBP22.63■■□□□ 1.21
TMEM260-207ENST00000555497 SSX1Q16384 188 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 MEDAGQ5VYS4 303 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 C19orf48Q6RUI8 117 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 LINC00299Q6ZSB3 139 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 PLEKHM3Q6ZWE6 761 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 ATCAYQ86WG3 371 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 PEX5LQ8IYB4 626 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 OR9A4Q8NGU2 314 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 TMEM80Q96HE8 168 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 CCDC3Q9BQI4 270 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 CHCHD6Q9BRQ6 235 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 ZNF350Q9GZX5 532 aa22.63■■□□□ 1.21
TMEM260-207ENST00000555497 RPL36Q9Y3U8 105 aaKnown RBP22.63■■□□□ 1.21
TMEM260-207ENST00000555497 IGHV1OR15-9A0A0B4J2B8 117 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 AGAP5A6NIR3 686 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 AP3D1O14617 1153 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 PLOD3O60568 738 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 WNT1P04628 370 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 ZNF136P52737 540 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 TSPAN31Q12999 210 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 NCF4Q15080 339 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 C11orf74Q86VG3 221 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 AVL9Q8NBF6 648 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 NR4A3Q92570 626 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 MSANTD3Q96H12 275 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 OPALINQ96PE5 141 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 SAP130Q9H0E3 1048 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 LMAN1LQ9HAT1 526 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 HMG20AQ9NP66 347 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 SPACA6W5XKT8 324 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 A0A087WV62 115 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 NPIPA5A0A0B4J1W7 369 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 NPIPA7E9PJI5 369 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 ARHGAP33O14559 1287 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 MED26O95402 600 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 NPIPA8P0DM63 369 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 SRFP11831 508 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 PTNP21246 168 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 CSTF2P33240 577 aaKnown RBP eCLIP22.62■■□□□ 1.21
TMEM260-207ENST00000555497 DUSP8Q13202 625 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 DCST2Q5T1A1 773 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 PAQR6Q6TCH4 344 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 TSTD1Q8NFU3 115 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 SLC41A3Q96GZ6 507 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 LRR1Q96L50 414 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 ZNF582Q96NG8 517 aaPredicted RBP22.62■■□□□ 1.21
TMEM260-207ENST00000555497 SLC2A4RGQ9NR83 387 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 ZNF232Q9UNY5 417 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 ERGIC3Q9Y282 383 aa22.62■■□□□ 1.21
TMEM260-207ENST00000555497 DSCR3O14972 297 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 PIP5K1CO60331 668 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 ALOX5P09917 674 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 PRG2P13727 222 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 SMSP52788 366 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 SLC25A30Q5SVS4 291 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 ARMC6Q6NXE6 501 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 ZNF554Q86TJ5 538 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 SLC34A3Q8N130 599 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 TMEM255BQ8WV15 326 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 TAPBPLQ9BX59 468 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 ANKRD19PQ9H560 264 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms