RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 HLA-DQA1Q5Y7H0 255 aa16.36■□□□□ 0.21
PSEN1-212ENST00000555254 GALNT10Q86SR1 603 aa16.36■□□□□ 0.21
PSEN1-212ENST00000555254 CATSPER1Q8NEC5 780 aa16.36■□□□□ 0.21
PSEN1-212ENST00000555254 LRTOMTQ8WZ04 291 aa16.36■□□□□ 0.21
PSEN1-212ENST00000555254 PROX1Q92786 737 aa16.36■□□□□ 0.21
PSEN1-212ENST00000555254 HSH2DQ96JZ2 352 aa16.36■□□□□ 0.21
PSEN1-212ENST00000555254 COL21A1Q96P44 957 aa16.36■□□□□ 0.21
PSEN1-212ENST00000555254 TREX2Q9BQ50 279 aaPredicted RBP16.36■□□□□ 0.21
PSEN1-212ENST00000555254 LMF2Q9BU23 707 aaKnown RBP16.36■□□□□ 0.21
PSEN1-212ENST00000555254 BDH2Q9BUT1 245 aa16.36■□□□□ 0.21
PSEN1-212ENST00000555254 MTHFD2LQ9H903 347 aaPredicted RBP16.36■□□□□ 0.21
PSEN1-212ENST00000555254 Q9N2J8 555 aa16.36■□□□□ 0.21
PSEN1-212ENST00000555254 SEC14L3Q9UDX4 400 aa16.36■□□□□ 0.21
PSEN1-212ENST00000555254 SLC13A4Q9UKG4 626 aa16.36■□□□□ 0.21
PSEN1-212ENST00000555254 ZNF232Q9UNY5 417 aa16.36■□□□□ 0.21
PSEN1-212ENST00000555254 ZNF891A8MT65 544 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-212ENST00000555254 GNGT2O14610 69 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 PCDH17O14917 1159 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 NKX2-2O95096 273 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 H6PDO95479 791 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 IGHEP01854 428 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 ALPPP05187 535 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 ATP6V1C1P21283 382 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 SOX18P35713 384 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 VHLP40337 213 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 PTDSS1P48651 473 aaKnown RBP16.35■□□□□ 0.21
PSEN1-212ENST00000555254 EMDP50402 254 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 SFT2D3Q587I9 215 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 HEPHL1Q6MZM0 1159 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 MRPL14Q6P1L8 145 aaKnown RBP16.35■□□□□ 0.21
PSEN1-212ENST00000555254 WDR53Q7Z5U6 358 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-212ENST00000555254 ANKRD37Q7Z713 158 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 SIMC1Q8NDZ2 872 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 CHDHQ8NE62 594 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-212ENST00000555254 SPPL2AQ8TCT8 520 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 SLC2A12Q8TD20 617 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 PMM1Q92871 262 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 TAMM41Q96BW9 452 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 POLE3Q9NRF9 147 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 KCND3Q9UK17 655 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 PADI2Q9Y2J8 665 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 OR10H1Q9Y4A9 318 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 KCNE3Q9Y6H6 103 aa16.35■□□□□ 0.21
PSEN1-212ENST00000555254 NME6O75414 186 aaPredicted RBP16.34■□□□□ 0.21
PSEN1-212ENST00000555254 STX11O75558 287 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 GCM2O75603 506 aaPredicted RBP16.34■□□□□ 0.21
PSEN1-212ENST00000555254 OPN1SWP03999 348 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 CHRM4P08173 479 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 ITGA2P17301 1181 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 DCAF7P61962 342 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 NCF4Q15080 339 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 ATP6AP1Q15904 470 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 DCST2Q5T1A1 773 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 SLC29A4Q7RTT9 530 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 CPEB2Q7Z5Q1 589 aaKnown RBP16.34■□□□□ 0.21
PSEN1-212ENST00000555254 AMIGO2Q86SJ2 522 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 ZDHHC21Q8IVQ6 265 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 PEX5LQ8IYB4 626 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 FAM86B1Q8N7N1 296 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 ZNF615Q8N8J6 731 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 C16orf52Q8NHV5 167 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 GEMIN6Q8WXD5 167 aaKnown RBP16.34■□□□□ 0.21
PSEN1-212ENST00000555254 CENPNQ96H22 339 aaPredicted RBP16.34■□□□□ 0.21
PSEN1-212ENST00000555254 VCXQ9H320 206 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 MRTO4Q9UKD2 239 aaKnown RBP16.34■□□□□ 0.21
PSEN1-212ENST00000555254 FARSAQ9Y285 508 aaKnown RBP16.34■□□□□ 0.21
PSEN1-212ENST00000555254 IFT52Q9Y366 437 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 PTRH2Q9Y3E5 179 aaKnown RBP16.34■□□□□ 0.21
PSEN1-212ENST00000555254 WDR45Q9Y484 360 aa16.34■□□□□ 0.21
PSEN1-212ENST00000555254 GPC6Q9Y625 555 aaPredicted RBP16.34■□□□□ 0.21
PSEN1-212ENST00000555254 PRAMEF27A3QJZ7 478 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 OR6C76A6NM76 312 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 C21orf140B9A014 251 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 HRKO00198 91 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 TERTO14746 1132 aaKnown RBP16.33■□□□□ 0.2
PSEN1-212ENST00000555254 CLOCKO15516 846 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 MFN2O95140 757 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 DDAH2O95865 285 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 FABP3P05413 133 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 TRHRP34981 398 aaPredicted RBP16.33■□□□□ 0.2
PSEN1-212ENST00000555254 FOLR3P41439 243 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 RPS18P62269 152 aaKnown RBP16.33■□□□□ 0.2
PSEN1-212ENST00000555254 CHRNEQ04844 493 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 DUSP8Q13202 625 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 EXOSC6Q5RKV6 272 aaKnown RBP16.33■□□□□ 0.2
PSEN1-212ENST00000555254 ATP1A1-AS1Q5TC04 95 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 FAM69BQ5VUD6 431 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 LANCL3Q6ZV70 420 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 VTCN1Q7Z7D3 282 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 SMYD1Q8NB12 490 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 OR10Q1Q8NGQ4 319 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 HOXB13Q92826 284 aaPredicted RBP16.33■□□□□ 0.2
PSEN1-212ENST00000555254 VSTM2LQ96N03 204 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 SDF2Q99470 211 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 SPSB2Q99619 263 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 LPAR4Q99677 370 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 GPR87Q9BY21 358 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 KLHL4Q9C0H6 718 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 RUBCNLQ9H714 662 aa16.33■□□□□ 0.2
PSEN1-212ENST00000555254 IL1RAPQ9NPH3 570 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms