RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 LCN8Q6JVE9 175 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 TUBA3EQ6PEY2 450 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 PCSK4Q6UW60 755 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 C6orf120Q7Z4R8 191 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 SERPINA11Q86U17 422 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 DHFR2Q86XF0 187 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 SPPL2CQ8IUH8 684 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 MICU2Q8IYU8 434 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 CYP4Z2PQ8N1L4 340 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 AMER2Q8N7J2 671 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 ZNF441Q8N8Z8 693 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 CDRT4Q8N9R6 151 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 NUP43Q8NFH3 380 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 BHLHE22Q8NFJ8 381 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-218ENST00000555213 OR52N2Q8NGI0 321 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 FAM110BQ8TC76 370 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 PNPT1Q8TCS8 783 aaKnown RBP10.07□□□□□ -0.8
SHMT2-218ENST00000555213 JADE3Q92613 823 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 PNPLA2Q96AD5 504 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 SPACA9Q96E40 222 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-218ENST00000555213 NEURL3Q96EH8 262 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 FAM120BQ96EK7 910 aaKnown RBP10.07□□□□□ -0.8
SHMT2-218ENST00000555213 HSPBAP1Q96EW2 488 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 LCORQ96JN0 433 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-218ENST00000555213 VSTM2LQ96N03 204 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 BTBD9Q96Q07 612 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 KCTD14Q9BQ13 255 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-218ENST00000555213 SLC35A5Q9BS91 424 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 RSPO3Q9BXY4 272 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-218ENST00000555213 GORASP2Q9H8Y8 452 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 ANKRA2Q9H9E1 313 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 LIN28AQ9H9Z2 209 aaKnown RBP10.07□□□□□ -0.8
SHMT2-218ENST00000555213 FOLH1BQ9HBA9 442 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 S100A14Q9HCY8 104 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 Q9N2J8 555 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 TIMMDC1Q9NPL8 285 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 EQTNQ9NQ60 294 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 ANKRD10Q9NXR5 420 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 PLA2G3Q9NZ20 509 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 LRFN1Q9P244 771 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 MRTO4Q9UKD2 239 aaKnown RBP10.07□□□□□ -0.8
SHMT2-218ENST00000555213 PRDM4Q9UKN5 801 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 FAF1Q9UNN5 650 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-218ENST00000555213 AP3M1Q9Y2T2 418 aa10.07□□□□□ -0.8
SHMT2-218ENST00000555213 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 ELOVL7A1L3X0 281 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 TMEM200CA6NKL6 621 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 FAM220BPB1ANY3 271 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 K7EM74 188 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 TP53I11O14683 189 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 ARPC2O15144 300 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 SLC25A12O75746 678 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 SOX30O94993 753 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 F10P00742 488 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 C8BP07358 591 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 CHI3L1P36222 383 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-218ENST00000555213 SOX3P41225 446 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 TNFSF10P50591 281 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 ANXA11P50995 505 aaKnown RBP10.06□□□□□ -0.8
SHMT2-218ENST00000555213 CRYBA2P53672 197 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 MRPS22P82650 360 aaKnown RBP10.06□□□□□ -0.8
SHMT2-218ENST00000555213 NFATC3Q12968 1075 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 BNIP2Q12982 314 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 FLOT2Q14254 428 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 INAQ16352 499 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 EXOSC6Q5RKV6 272 aaKnown RBP10.06□□□□□ -0.8
SHMT2-218ENST00000555213 SLC6A19Q695T7 634 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 MFSD12Q6NUT3 480 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 AAGABQ6PD74 315 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 ZCCHC12Q6PEW1 402 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 ANGPTL8Q6UXH0 198 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 CYP2R1Q6VVX0 501 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 C16orf47Q6ZP98 133 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-218ENST00000555213 RTL4Q6ZR62 310 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 Q6ZS92 163 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 RNF130Q86XS8 419 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 TMEM178AQ8NBL3 297 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 FAM98AQ8NCA5 519 aaKnown RBP10.06□□□□□ -0.8
SHMT2-218ENST00000555213 HIPK4Q8NE63 616 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 OR2T12Q8NG77 320 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 OR52E4Q8NGH9 312 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 OR5AK3PQ8NH89 298 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 PYDC1Q8WXC3 89 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 ADIPOR1Q96A54 375 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 GIMAP5Q96F15 307 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 REXO5Q96IC2 774 aaKnown RBP10.06□□□□□ -0.8
SHMT2-218ENST00000555213 SGCZQ96LD1 299 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 MFRPQ9BY79 579 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 NXF5Q9H1B4 397 aaKnown RBP10.06□□□□□ -0.8
SHMT2-218ENST00000555213 TRIM45Q9H8W5 580 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-218ENST00000555213 ZBTB20Q9HC78 741 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-218ENST00000555213 ANAPC2Q9UJX6 822 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 DTX4Q9Y2E6 619 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 GPR55Q9Y2T6 319 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-218ENST00000555213 PCDHGB3Q9Y5G1 929 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 MED13Q9UHV7 2174 aa10.06□□□□□ -0.8
SHMT2-218ENST00000555213 TLN1Q9Y490 2541 aaKnown RBP10.05□□□□□ -0.8
SHMT2-218ENST00000555213 AQP12BA6NM10 295 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 EVPLLA8MZ36 301 aa10.05□□□□□ -0.8
SHMT2-218ENST00000555213 TO15178 435 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms