RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 KCNE4Q8WWG9 221 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 COL21A1Q96P44 957 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 DCBLD2Q96PD2 775 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 SDF2Q99470 211 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 WFDC6Q9BQY6 131 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 TRIM15Q9C019 465 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 DUSP22Q9NRW4 184 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 FLRT3Q9NZU0 649 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 KCND3Q9UK17 655 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 RAXQ9Y2V3 346 aa9.95□□□□□ -0.82
TDP1-211ENST00000555178 MAP1BP46821 2468 aaKnown RBP9.95□□□□□ -0.82
TDP1-211ENST00000555178 NSG1A0A0A6YYJ2 146 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 A0A1W2PQ72 361 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 CLDN24A6NM45 220 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 C17orf51A8MQB3 221 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 WWP2O00308 870 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 TIPRLO75663 272 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 KCNK2O95069 426 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 CRISP3P54108 245 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 SESN3P58005 492 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 DUSP7Q16829 419 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 ATAD3BQ5T9A4 648 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 TYW3Q6IPR3 259 aaKnown RBP9.94□□□□□ -0.82
TDP1-211ENST00000555178 TCTN3Q6NUS6 607 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 ZNF441Q8N8Z8 693 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 PSMF1Q92530 271 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 ARSGQ96EG1 525 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 HSH2DQ96JZ2 352 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 STACQ99469 402 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 WWTR1Q9GZV5 400 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 COPS7AQ9UBW8 275 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 KCNE5Q9UJ90 142 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 GPR55Q9Y2T6 319 aaPredicted RBP9.94□□□□□ -0.82
TDP1-211ENST00000555178 TPRP12270 2363 aaKnown RBP9.94□□□□□ -0.82
TDP1-211ENST00000555178 PRAMEF25A6NGN4 478 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 DUXAA6NLW8 204 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 PEX12O00623 359 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 NCKAP5O14513 1909 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 BAG2O95816 211 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 FREM3P0C091 2139 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 OR1E2P47887 323 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 NR0B1P51843 470 aaKnown RBP9.94□□□□□ -0.82
TDP1-211ENST00000555178 POU6F2P78424 691 aaPredicted RBP9.94□□□□□ -0.82
TDP1-211ENST00000555178 GPR68Q15743 365 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 MAPK14Q16539 360 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 ARHGAP11BQ3KRB8 267 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 CRB2Q5IJ48 1285 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 ZCCHC12Q6PEW1 402 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 CBLL1Q75N03 491 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 CCDC80Q76M96 950 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 VRK2Q86Y07 508 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 SPACA3Q8IXA5 215 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 SIRT6Q8N6T7 355 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 GPR32P1Q8NGA4 272 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 SNIP1Q8TAD8 396 aaKnown RBP9.94□□□□□ -0.82
TDP1-211ENST00000555178 KIAA1143Q96AT1 154 aaPredicted RBP9.94□□□□□ -0.82
TDP1-211ENST00000555178 EFHD2Q96C19 240 aaPredicted RBP9.94□□□□□ -0.82
TDP1-211ENST00000555178 CRELD1Q96HD1 420 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 RNF145Q96MT1 663 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 BTBD9Q96Q07 612 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 TRNT1Q96Q11 434 aaKnown RBP9.94□□□□□ -0.82
TDP1-211ENST00000555178 ZNF350Q9GZX5 532 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 CCDC86Q9H6F5 360 aaKnown RBP9.94□□□□□ -0.82
TDP1-211ENST00000555178 CPNE5Q9HCH3 593 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 EXD2Q9NVH0 621 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 PRODH2Q9UF12 536 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 C19orf25Q9UFG5 118 aaPredicted RBP9.94□□□□□ -0.82
TDP1-211ENST00000555178 ANAPC2Q9UJX6 822 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 ANGPTL2Q9UKU9 493 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 SSUH2Q9Y2M2 353 aa9.94□□□□□ -0.82
TDP1-211ENST00000555178 BSNQ9UPA5 3926 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 DSPPQ9NZW4 1301 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 C2orf92A0A1B0GVN3 265 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 ARGFXA6NJG6 315 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 MFN2O95140 757 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 EPPINO95925 133 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 F10P00742 488 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 PSMA4P25789 261 aaKnown RBP9.93□□□□□ -0.82
TDP1-211ENST00000555178 ANXA11P50995 505 aaKnown RBP9.93□□□□□ -0.82
TDP1-211ENST00000555178 ZNHIT3Q15649 155 aaPredicted RBP9.93□□□□□ -0.82
TDP1-211ENST00000555178 TBCELQ5QJ74 424 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 INTS11Q5TA45 600 aaKnown RBP9.93□□□□□ -0.82
TDP1-211ENST00000555178 ZNF468Q5VIY5 522 aaPredicted RBP9.93□□□□□ -0.82
TDP1-211ENST00000555178 PLAG1Q6DJT9 500 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 BCORP1Q8N888 145 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 ZNF248Q8NDW4 579 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 CHDHQ8NE62 594 aaPredicted RBP9.93□□□□□ -0.82
TDP1-211ENST00000555178 LRTOMTQ8WZ04 291 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 SLC47A1Q96FL8 570 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 ART5Q96L15 291 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 BTBD2Q9BX70 525 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 RNPEPL1Q9HAU8 725 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 ZBTB20Q9HC78 741 aaPredicted RBP9.93□□□□□ -0.82
TDP1-211ENST00000555178 CCM2LQ9NUG4 571 aaPredicted RBP9.93□□□□□ -0.82
TDP1-211ENST00000555178 THUMPD1Q9NXG2 353 aaKnown RBP9.93□□□□□ -0.82
TDP1-211ENST00000555178 WDR45Q9Y484 360 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 OR10H1Q9Y4A9 318 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 AP4S1Q9Y587 144 aa9.93□□□□□ -0.82
TDP1-211ENST00000555178 GPC6Q9Y625 555 aaPredicted RBP9.93□□□□□ -0.82
TDP1-211ENST00000555178 TMEM247A6NEH6 219 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms