RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 PIP5KL1Q5T9C9 394 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 SLC24A5Q71RS6 500 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 Q7L0L9 218 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 P4HA3Q7Z4N8 544 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 KIAA1328Q86T90 577 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 ITIH5Q86UX2 942 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 PAQR7Q86WK9 346 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 C17orf64Q86WR6 236 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 KATNAL2Q8IYT4 538 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 ELMOD1Q8N336 334 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 GPR137CQ8N3F9 429 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 OR2T12Q8NG77 320 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 KCNG3Q8TAE7 436 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 AMDHD1Q96NU7 426 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 TGM7Q96PF1 710 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 IQCGQ9H095 443 aaKnown RBP4.51□□□□□ -1.69
VRK1-203ENST00000555067 HAUS4Q9H6D7 363 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 ZDHHC18Q9NUE0 388 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 UFSP2Q9NUQ7 469 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 POLKQ9UBT6 870 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 FZR1Q9UM11 496 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 PACSIN2Q9UNF0 486 aaPredicted RBP4.51□□□□□ -1.69
VRK1-203ENST00000555067 STK38LQ9Y2H1 464 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 SLC6A5Q9Y345 797 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 FKBP7Q9Y680 259 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 CCDC7Q96M83 1385 aa4.51□□□□□ -1.69
VRK1-203ENST00000555067 SUPT3HB4E1H0 165 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 NBR2O15453 112 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 CRLF1O75462 422 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 NXPH2O95156 264 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 KRT14P02533 472 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 ZNF26P17031 533 aaPredicted RBP4.5□□□□□ -1.69
VRK1-203ENST00000555067 EFNA1P20827 205 aaPredicted RBP4.5□□□□□ -1.69
VRK1-203ENST00000555067 ZNF10P21506 573 aaPredicted RBP4.5□□□□□ -1.69
VRK1-203ENST00000555067 TPMTP51580 245 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 RAG2P55895 527 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 ALKBH6Q3KRA9 238 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 FAAP20Q6NZ36 180 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 ZNF790Q6PG37 636 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 KCNIP4Q6PIL6 250 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 ASRGL1Q7L266 308 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 LINC00518Q8N0U6 118 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 GPC2Q8N158 579 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 COMMD1Q8N668 190 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 MNS1Q8NEH6 495 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 OR13C3Q8NGS6 347 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 OR9A1PQ8NGU1 263 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 NANPQ8TBE9 248 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 FAM81AQ8TBF8 368 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 SCFD1Q8WVM8 642 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 FAM3CQ92520 227 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 MCUR1Q96AQ8 359 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 KIAA1143Q96AT1 154 aaPredicted RBP4.5□□□□□ -1.69
VRK1-203ENST00000555067 RPRD1AQ96P16 312 aaPredicted RBP4.5□□□□□ -1.69
VRK1-203ENST00000555067 ATOH8Q96SQ7 321 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 UBXN6Q9BZV1 441 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 TMEM185BQ9H7F4 350 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 ANKRA2Q9H9E1 313 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 STARD5Q9NSY2 213 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 SLC2A8Q9NY64 477 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 NLGN3Q9NZ94 848 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 ZNF639Q9UID6 485 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 ADAM28Q9UKQ2 775 aa4.5□□□□□ -1.69
VRK1-203ENST00000555067 KIF27Q86VH2 1401 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 TTC26A0AVF1 554 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 ESYT2A0FGR8 921 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 NDUFAF8A1L188 74 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 KRTAP16-1A8MUX0 517 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 NDUFS8O00217 210 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 CCSO14618 274 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 DUX1O43812 170 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 TSPAN2O60636 221 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 MTRF1O75570 445 aaKnown RBP4.49□□□□□ -1.69
VRK1-203ENST00000555067 TSHBP01222 138 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 LYNP07948 512 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 CD48P09326 243 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 SLC35G4P0C7Q5 338 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 TROVE2P10155 538 aaKnown RBP eCLIP4.49□□□□□ -1.69
VRK1-203ENST00000555067 CPN2P22792 545 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 UCP1P25874 307 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 CHMLP26374 656 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 ATP5C1P36542 298 aaKnown RBP4.49□□□□□ -1.69
VRK1-203ENST00000555067 FDFT1P37268 417 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 CLDN8P56748 225 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 MYL7Q01449 175 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 ENPP2Q13822 863 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 TFDP1Q14186 410 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 DUSP5Q16690 384 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 KLHL40Q2TBA0 621 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 DMKNQ6E0U4 476 aaPredicted RBP4.49□□□□□ -1.69
VRK1-203ENST00000555067 OR4F3Q6IEY1 312 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 ZNF562Q6V9R5 426 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 LUZP2Q86TE4 346 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 CCDC185Q8N715 623 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 TCEANCQ8N8B7 351 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 SPERTQ8NA61 448 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 RDH11Q8TC12 318 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 ZNF473Q8WTR7 871 aaKnown RBP4.49□□□□□ -1.69
VRK1-203ENST00000555067 ST8SIA1Q92185 356 aa4.49□□□□□ -1.69
VRK1-203ENST00000555067 TMIGD2Q96BF3 282 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms