RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ZNF805Q5CZA5 627 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 RNASE10Q5GAN6 216 aaKnown RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 CES4AQ5XG92 561 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 ATG9BQ674R7 924 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 OVCH1Q7RTY7 1134 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 DNAJB8Q8NHS0 232 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 CANT1Q8WVQ1 401 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 BPIFA2Q96DR5 249 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 HCAR1Q9BXC0 346 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 REEP4Q9H6H4 257 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 NLE1Q9NVX2 485 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 GOLT1BQ9Y3E0 138 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 PTRH2Q9Y3E5 179 aaKnown RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 FAM163BP0C2L3 166 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 FBXO45P0C2W1 286 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF888P0CJ79 500 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 ANXA7P20073 488 aaKnown RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 FPR1P21462 350 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 TBPL1P62380 186 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 GK2Q14410 553 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 ABHD12BQ7Z5M8 362 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 CPNE8Q86YQ8 564 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 RAB39BQ96DA2 213 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 UHRF1Q96T88 793 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 DPH7Q9BTV6 452 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 POTEKPQ9BYX7 375 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 MAGI3Q5TCQ9 1506 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 USP2O75604 605 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 CKMT2P17540 419 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 IL1RNP18510 177 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 MAOBP27338 520 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 ACTA2P62736 377 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 ACTG2P63267 376 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 FAM199XQ6PEV8 388 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 CYP4V2Q6ZWL3 525 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 METTL4Q8N3J2 472 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 INSL5Q9Y5Q6 135 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 SEC14L2O76054 403 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 NXPH3O95157 252 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 DCNP07585 359 aaKnown RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 HOXC8P31273 242 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 PPP5CP53041 499 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 PTCHD3Q3KNS1 767 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 MS4A13Q5J8X5 152 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 FNDC9Q8TBE3 224 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 TPSD1Q9BZJ3 242 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 MTCH1Q9NZJ7 389 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 POLHQ9Y253 713 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 CEP170BQ9Y4F5 1589 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 A8MVM7 634 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 C4BPAP04003 597 aaKnown RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 MAGEB1P43366 347 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 SEC61A1P61619 476 aaKnown RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 PDLIM3Q53GG5 364 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 SLC27A4Q6P1M0 643 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 PLXDC1Q8IUK5 500 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 OR4N2Q8NGD1 307 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 POMPQ9Y244 141 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 NME7Q9Y5B8 376 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 ARPC4-TTLL3A0A0A6YYG9 625 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 SEC14L6B5MCN3 397 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 AQP7O14520 342 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 BPIP17213 487 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 SLC18A1P54219 525 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 PLAC9Q5JTB6 97 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 AADACL3Q5VUY0 350 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 TMEM173Q86WV6 379 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 OR6C4Q8NGE1 309 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 ELK4P28324 431 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 RPL13AP40429 203 aaKnown RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 ACTC1P68032 377 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 ACTA1P68133 377 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 HIST2H3PS2Q5TEC6 136 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 SYPL2Q5VXT5 272 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 FAM198BQ6UWH4 519 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 MOB3CQ70IA8 216 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 IRF2BP2Q7Z5L9 587 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 SCCPDHQ8NBX0 429 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 MITD1Q8WV92 249 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 PPIL3Q9H2H8 161 aaKnown RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 VDAC3Q9Y277 283 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 SULT2B1O00204 365 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 LATO43561 262 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF45Q02386 682 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 OR7A5Q15622 319 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 SFRP4Q6FHJ7 346 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 PLBD1Q6P4A8 553 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 ASCC1Q8N9N2 400 aaKnown RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 TXNDC5Q8NBS9 432 aaKnown RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 RPLP0P6Q8NHW5 317 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 VRK1Q99986 396 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 TMEM175Q9BSA9 504 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 MRI1Q9BV20 369 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 SLC2A8Q9NY64 477 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 RPL26L1Q9UNX3 145 aaKnown RBP6.54□□□□□ -1.36
SYNE2-216ENST00000555002 DIP2BQ9P265 1576 aa6.54□□□□□ -1.36
SYNE2-216ENST00000555002 IL7P13232 177 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 KDELR2P33947 212 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 HTR2BP41595 481 aa6.53□□□□□ -1.36
SYNE2-216ENST00000555002 EPHA5P54756 1037 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms