RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 C3P1Q6ZMU1 363 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 GHDCQ8N2G8 530 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 CDRT4Q8N9R6 151 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 WDSUB1Q8N9V3 476 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 OR5D16Q8NGK9 328 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 CEP70Q8NHQ1 597 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 JADE3Q92613 823 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 CDS1Q92903 461 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 ZNF597Q96LX8 424 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 SECISBP2Q96T21 854 aaKnown RBP11.29□□□□□ -0.6
SYNE2-214ENST00000554928 C3orf14Q9HBI5 128 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 Q9N2J8 555 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 TCF7L2Q9NQB0 619 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 SDR39U1Q9NRG7 319 aaPredicted RBP11.29□□□□□ -0.6
SYNE2-214ENST00000554928 SLC6A13Q9NSD5 602 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 KLRF1Q9NZS2 232 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 SPRR3Q9UBC9 169 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 DCTN4Q9UJW0 460 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 MAPRE3Q9UPY8 281 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 ZNF835Q9Y2P0 537 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 HIVEP3Q5T1R4 2406 aa11.29□□□□□ -0.6
SYNE2-214ENST00000554928 NPIPA5A0A0B4J1W7 369 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 TRGV8A0A0C4DH27 118 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 RNF103-CHMP3A0A140T963 221 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 PRSS51A0A1B0GVH4 220 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 NPIPA7E9PJI5 369 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 SCO2O43819 266 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 FADS1O60427 444 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 KCNK2O95069 426 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 IGHG3P01860 377 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 GSNP06396 782 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 NPIPA8P0DM63 369 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 IDO1P14902 403 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 DDX5P17844 614 aaKnown RBP11.28□□□□□ -0.6
SYNE2-214ENST00000554928 PTPN6P29350 595 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 TRPC1P48995 793 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 PNLIPRP2P54317 469 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 PRR5P85299 388 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 ZNHIT3Q15649 155 aaPredicted RBP11.28□□□□□ -0.6
SYNE2-214ENST00000554928 GRAMD1BQ3KR37 738 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 GTDC1Q4AE62 458 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 EMC4Q5J8M3 183 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 TIGD3Q6B0B8 471 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 CDC73Q6P1J9 531 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 TMEM81Q6P7N7 255 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 ACAD11Q709F0 780 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 TRILQ7L0X0 811 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 C6orf120Q7Z4R8 191 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 FJX1Q86VR8 437 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 SLC22A16Q86VW1 577 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 FAM109AQ8N4B1 249 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 FAM26EQ8N5C1 309 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 FAM110BQ8TC76 370 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 SFXN5Q8TD22 340 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 VPS33AQ96AX1 596 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 TMEM41AQ96HV5 264 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 CCDC115Q96NT0 180 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 KLHDC3Q9BQ90 382 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 UBQLN3Q9H347 655 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 NEUROD4Q9HD90 331 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 NPHS2Q9NP85 383 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 SERHLQ9NQF3 203 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 FBXL2Q9UKC9 423 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 BOKQ9UMX3 212 aaPredicted RBP11.28□□□□□ -0.6
SYNE2-214ENST00000554928 C15orf41Q9Y2V0 281 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 NCKAP5O14513 1909 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 NINQ8N4C6 2090 aa11.28□□□□□ -0.6
SYNE2-214ENST00000554928 ACOT7O00154 380 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 POLR3GO15318 223 aaPredicted RBP11.27□□□□□ -0.61
SYNE2-214ENST00000554928 SLC22A3O75751 556 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 AGFG2O95081 481 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 SNX4O95219 450 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 UTS2O95399 124 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 TGDSO95455 350 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 PGRP06401 933 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 ALOX5P09917 674 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 GDF1P27539 372 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 EVI2BP34910 448 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 KRT20P35900 424 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 CA7P43166 264 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 MASP1P48740 699 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 PRIM2P49643 509 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 STX5Q13190 355 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 EFR3AQ14156 821 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 DECR1Q16698 335 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 TIGD2Q4W5G0 525 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 EIPR1Q53HC9 387 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 TBCELQ5QJ74 424 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 ANXA8L1Q5VT79 327 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 SLC30A6Q6NXT4 461 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 DNAJC14Q6Y2X3 702 aaPredicted RBP11.27□□□□□ -0.61
SYNE2-214ENST00000554928 Q6ZPB1 254 aaPredicted RBP11.27□□□□□ -0.61
SYNE2-214ENST00000554928 MARCH3Q86UD3 253 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 DOLPP1Q86YN1 238 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 FUNDC1Q8IVP5 155 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 RPRMLQ8N4K4 120 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 NATD1Q8N6N6 113 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 COX18Q8N8Q8 333 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 OR56A1Q8NGH5 318 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 OR4C3Q8NH37 302 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms