RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 PTMSP20962 102 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 CERS1P27544 350 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 PTPN6P29350 595 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 HNRNPH1P31943 449 aaKnown RBP4.34□□□□□ -1.71
ATXN3-229ENST00000554672 ACVR1BP36896 505 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 CASP3P42574 277 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 KCNJ5P48544 419 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 FBXW4P57775 412 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 IL2P60568 153 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 BASP1P80723 227 aaKnown RBP4.34□□□□□ -1.71
ATXN3-229ENST00000554672 IGLV3-21P80748 117 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-229ENST00000554672 TIAL1Q01085 375 aaKnown RBP eCLIP4.34□□□□□ -1.71
ATXN3-229ENST00000554672 ID2Q02363 134 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 FUT7Q11130 342 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 GPS1Q13098 491 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 FGFBP1Q14512 234 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 RPS6KA2Q15349 733 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 ADPRMQ3LIE5 342 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 RABL3Q5HYI8 236 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 C6orf52Q5T4I8 152 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 ADAM5Q6NVV9 412 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 PLXDC2Q6UX71 529 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 DNM1P46Q6ZS02 220 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 RHOUQ7L0Q8 258 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 CHMP1BQ7LBR1 199 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 ZNF550Q7Z398 422 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 P4HA3Q7Z4N8 544 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 TMPRSS11BQ86T26 416 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 GRAMD2AQ8IUY3 354 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 OR4N5Q8IXE1 308 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 CMTM4Q8IZR5 234 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 SYCE1Q8N0S2 351 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 GCNT2Q8N0V5 402 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 KRT78Q8N1N4 520 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 CNEP1R1Q8N9A8 125 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 LRRC57Q8N9N7 239 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 SRFBP1Q8NEF9 429 aaKnown RBP4.34□□□□□ -1.71
ATXN3-229ENST00000554672 FAM83FQ8NEG4 500 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-229ENST00000554672 OR1J4Q8NGS1 313 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 C1orf54Q8WWF1 131 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 AKAP1Q92667 903 aaKnown RBP eCLIP4.34□□□□□ -1.71
ATXN3-229ENST00000554672 PPWD1Q96BP3 646 aaKnown RBP4.34□□□□□ -1.71
ATXN3-229ENST00000554672 CTHRC1Q96CG8 243 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 LINGO1Q96FE5 620 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 FBXL20Q96IG2 436 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 TSNARE1Q96NA8 513 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 GAL3ST4Q96RP7 486 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 CSF3RQ99062 836 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 RHNO1Q9BSD3 238 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 TBCDQ9BTW9 1192 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 CAPS2Q9BXY5 557 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 PLA2G12AQ9BZM1 189 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 SHARPINQ9H0F6 387 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 SLCO5A1Q9H2Y9 848 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 POFUT1Q9H488 388 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 ZMAT4Q9H898 229 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 COPS7BQ9H9Q2 264 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-229ENST00000554672 SNX15Q9NRS6 342 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 OXSMQ9NWU1 459 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 TEX10Q9NXF1 929 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-229ENST00000554672 CLCF1Q9UBD9 225 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 FBXO5Q9UKT4 447 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 DLGAP4Q9Y2H0 992 aa4.34□□□□□ -1.71
ATXN3-229ENST00000554672 ZCWPW2A0A1B0GU75 182 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 GRID2IPA4D2P6 1211 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 PLOD2O00469 737 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 EMC8O43402 210 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 HCRTR2O43614 444 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 FGF17O60258 216 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 GPRIN2O60269 458 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 SIX3O95343 332 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 GUCA1CO95843 209 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 TBX6O95947 436 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 PLAUP00749 431 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 CGAP01215 116 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 FESP07332 822 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 F7P08709 466 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 ALOX15P16050 662 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 NAGAP17050 411 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 TPSB2P20231 275 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 CPN2P22792 545 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 ATP5A1P25705 553 aaKnown RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 ZFP36P26651 326 aaKnown RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 TLX1P31314 330 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 GALNSP34059 522 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 SLC1A2P43004 574 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 STARP49675 285 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 TMED10P49755 219 aaKnown RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 LHX2P50458 406 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 NRG3P56975 720 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 SLC37A1P57057 533 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 PLIN5Q00G26 463 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 SNX1Q13596 522 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 ZNF267Q14586 743 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 EBPQ15125 230 aaKnown RBP4.33□□□□□ -1.72
ATXN3-229ENST00000554672 TPSAB1Q15661 275 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 BCL2A1Q16548 175 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 CCNG2Q16589 344 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 AP5B1Q2VPB7 878 aa4.33□□□□□ -1.72
ATXN3-229ENST00000554672 KBTBD12Q3ZCT8 623 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms