RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 TIMM50Q3ZCQ8 353 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 SIX5Q8N196 739 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 SRFBP1Q8NEF9 429 aaKnown RBP13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 C9orf43Q8TAL5 461 aaPredicted RBP13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 XAGE5Q8WWM1 108 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 CNRIP1Q96F85 164 aaPredicted RBP13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 OR2A5Q96R48 311 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 PIP5K1AQ99755 562 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 C3orf14Q9HBI5 128 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 ZCCHC3Q9NUD5 404 aaKnown RBP13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 CLN6Q9NWW5 311 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 TRPC4Q9UBN4 977 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 GRIP1Q9Y3R0 1128 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 C5orf58C9J3I9 102 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 PLD2O14939 933 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 P2RX6O15547 441 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 DNAJB6O75190 326 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 SCG5P05408 212 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 HBQ1P09105 142 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 LSSP48449 732 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 CRISP1P54107 249 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 TRA2BP62995 288 aaKnown RBP13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 PSPHP78330 225 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 HHEXQ03014 270 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 DUSP2Q05923 314 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 RGS1Q08116 209 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 GPR19Q15760 415 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 LIPKQ5VXJ0 399 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 SAXO2Q658L1 398 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 FCRL6Q6DN72 434 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 GLCCI1Q86VQ1 547 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 SHISA5Q8N114 240 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 TMEM203Q969S6 136 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 C11orf54Q9H0W9 315 aaPredicted RBP13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 ABCB9Q9NP78 766 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 THSD1Q9NS62 852 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 TAS2R7Q9NYW3 318 aa13.74□□□□□ -0.21
PPP4R3A-201ENST00000554308 TMEM265A0A087WTH1 108 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 ZNF860A6NHJ4 632 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 HMX3A6NHT5 357 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 FFAR1O14842 300 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 PROM1O43490 865 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 ZNF217O75362 1048 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 NTSP30990 170 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 FRKP42685 505 aaPredicted RBP13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 PPM1FP49593 454 aaPredicted RBP13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 FAM209AQ5JX71 171 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 OLIG3Q7RTU3 272 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 HMGN2P46Q86SG4 172 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 PARGQ86W56 976 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 OR7G1Q8NGA0 311 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 COL26A1Q96A83 441 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 ORAI3Q9BRQ5 295 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 RSPO3Q9BXY4 272 aaPredicted RBP13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 MIXL1Q9H2W2 232 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 STARD5Q9NSY2 213 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 ACSS1Q9NUB1 689 aaPredicted RBP13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 EVA1BQ9NVM1 165 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 CNOT2Q9NZN8 540 aaKnown RBP13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 CENPBD1B2RD01 187 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 CHURC1-FNTBB4DL54 471 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 C10orf142B7Z368 130 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 HMGN4O00479 90 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 TBX19O60806 448 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 OR12D1P0DN82 309 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 ARAFP10398 606 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 ITGA2P17301 1181 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 DDX5P17844 614 aaKnown RBP13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 TEKQ02763 1124 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 SEC23BQ15437 767 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 MRM1Q6IN84 353 aaKnown RBP13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 REEP3Q6NUK4 255 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 TMEM107Q6UX40 140 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 FAM131AQ6UXB0 335 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 NATD1Q8N6N6 113 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 UBASH3BQ8TF42 649 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 ZDHHC1Q8WTX9 485 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 SLC7A6Q92536 515 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 CDX2Q99626 313 aaPredicted RBP13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 POT1Q9NUX5 634 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 ANGPT4Q9Y264 503 aa13.73□□□□□ -0.21
PPP4R3A-201ENST00000554308 C2orf74A8MZ97 194 aa13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 ERVH48-1M5A8F1 160 aa13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 TNFRSF10AO00220 468 aa13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 CDRT1O95170 752 aa13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 RORCP51449 518 aa13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 LIM2P55344 173 aa13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 UBE2IP63279 158 aaKnown RBP13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 SPHARQ15513 63 aa13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 ZNF770Q6IQ21 691 aaPredicted RBP13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 PAMR1Q6UXH9 720 aa13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 OR4N5Q8IXE1 308 aa13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 CADM2Q8N3J6 435 aa13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 SETD6Q8TBK2 473 aa13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 RSC1A1Q92681 617 aa13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 TMEM19Q96HH6 336 aa13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 LRRC61Q9BV99 259 aa13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 SLC25A19Q9HC21 320 aa13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 YARS2Q9Y2Z4 477 aaKnown RBP13.72□□□□□ -0.21
PPP4R3A-201ENST00000554308 SH3D21A4FU49 640 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms