RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 WWTR1Q9GZV5 400 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 EVA1AQ9H8M9 152 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 MTHFD2LQ9H903 347 aaPredicted RBP7.09□□□□□ -1.27
TDP1-209ENST00000554180 C6orf203Q9P0P8 240 aaPredicted RBP7.09□□□□□ -1.27
TDP1-209ENST00000554180 STOML1Q9UBI4 398 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 SEC14L3Q9UDX4 400 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 MRTO4Q9UKD2 239 aaKnown RBP7.09□□□□□ -1.27
TDP1-209ENST00000554180 CBLCQ9ULV8 474 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 AURKCQ9UQB9 309 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 IFT52Q9Y366 437 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 WDR45Q9Y484 360 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 OR10H1Q9Y4A9 318 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 PCDHGA10Q9Y5H3 936 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 SDK2Q58EX2 2172 aa7.09□□□□□ -1.27
TDP1-209ENST00000554180 SPTBN2O15020 2390 aa7.09□□□□□ -1.28
TDP1-209ENST00000554180 IGHV3-20A0A0C4DH32 117 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 AGAP5A6NIR3 686 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 TMEM229AB2RXF0 380 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 SOCS6O14544 535 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 DPM1O60762 260 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 NME6O75414 186 aaPredicted RBP7.08□□□□□ -1.28
TDP1-209ENST00000554180 SEC24DO94855 1032 aaPredicted RBP7.08□□□□□ -1.28
TDP1-209ENST00000554180 ZIC2O95409 532 aaPredicted RBP7.08□□□□□ -1.28
TDP1-209ENST00000554180 OPN1SWP03999 348 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 ALPPP05187 535 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 THBS1P07996 1170 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 PABPC4LP0CB38 370 aaKnown RBP7.08□□□□□ -1.28
TDP1-209ENST00000554180 ICAM2P13598 275 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 ITGA2P17301 1181 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 CD247P20963 164 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 FASP25445 335 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 DLSTP36957 453 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 KCNJ5P48544 419 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 NRG3P56975 720 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 RNF4P78317 190 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 KCNC4Q03721 635 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 CHRNEQ04844 493 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 SLC34A1Q06495 639 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 GK3PQ14409 553 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 LARS2Q15031 903 aaKnown RBP7.08□□□□□ -1.28
TDP1-209ENST00000554180 SNCBQ16143 134 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 LIN52Q52LA3 116 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 IFI44LQ53G44 452 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 EIPR1Q53HC9 387 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 RNF220Q5VTB9 566 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 TYW3Q6IPR3 259 aaKnown RBP7.08□□□□□ -1.28
TDP1-209ENST00000554180 DHRS4L2Q6PKH6 230 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 KIRREL2Q6UWL6 708 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 ERMP1Q7Z2K6 904 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 PIWIL3Q7Z3Z3 882 aaKnown RBP7.08□□□□□ -1.28
TDP1-209ENST00000554180 PPP1R32Q7Z5V6 425 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 MRGPREQ86SM8 312 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 GALNT10Q86SR1 603 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 KBTBD2Q8IY47 623 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 SLC34A3Q8N130 599 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 FAM86B1Q8N7N1 296 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 ZNF321PQ8N8H1 164 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 ZSCAN1Q8NBB4 408 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 M1APQ8TC57 530 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 SPPL2AQ8TCT8 520 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 ELP5Q8TE02 316 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 PIK3R3Q92569 461 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 PROX1Q92786 737 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 NKD1Q969G9 470 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 C8orf44Q96CB5 159 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 IMMP1LQ96LU5 166 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 GAL3ST4Q96RP7 486 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 SEPHS2Q99611 448 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 CHID1Q9BWS9 393 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 PINK1Q9BXM7 581 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 NXF5Q9H1B4 397 aaKnown RBP7.08□□□□□ -1.28
TDP1-209ENST00000554180 ARMC7Q9H6L4 198 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 MMP25Q9NPA2 562 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 IL1RAPQ9NPH3 570 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 AGPAT4Q9NRZ5 378 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 RIMS3Q9UJD0 308 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 ZNF223Q9UK11 482 aaPredicted RBP7.08□□□□□ -1.28
TDP1-209ENST00000554180 CEP295Q9C0D2 2601 aa7.08□□□□□ -1.28
TDP1-209ENST00000554180 SCN2AQ99250 2005 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 NSG1A0A0A6YYJ2 146 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 TRBV11-1A0A0K0K1C0 115 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 LOC101059948A0A1B0GTJ6 334 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 GXYLT2A0PJZ3 443 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 DCDC2BA2VCK2 349 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 NPIPB9F8W1W9 429 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 CASQ2O14958 399 aaPredicted RBP7.07□□□□□ -1.28
TDP1-209ENST00000554180 FCMRO60667 390 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 ABCB7O75027 752 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 DEAF1O75398 565 aaPredicted RBP7.07□□□□□ -1.28
TDP1-209ENST00000554180 ZFAND5O76080 213 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 IL33O95760 270 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 HPP00738 406 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 FABP3P05413 133 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 DBIP07108 87 aaKnown RBP7.07□□□□□ -1.28
TDP1-209ENST00000554180 FESP07332 822 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 NGFRP08138 427 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 NID1P14543 1247 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 NAGAP17050 411 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 GCKP35557 465 aa7.07□□□□□ -1.28
TDP1-209ENST00000554180 KRT20P35900 424 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms