RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 METTL7AQ9H8H3 244 aa11.78□□□□□ -0.52
XRCC3-206ENST00000554170 SH2D2AQ9NP31 389 aa11.78□□□□□ -0.52
XRCC3-206ENST00000554170 EQTNQ9NQ60 294 aa11.78□□□□□ -0.52
XRCC3-206ENST00000554170 DEPPQ9NTK1 212 aa11.78□□□□□ -0.52
XRCC3-206ENST00000554170 NTMQ9P121 344 aa11.78□□□□□ -0.52
XRCC3-206ENST00000554170 GPR45Q9Y5Y3 372 aa11.78□□□□□ -0.52
XRCC3-206ENST00000554170 CHCHD2Q9Y6H1 151 aaPredicted RBP11.78□□□□□ -0.52
XRCC3-206ENST00000554170 NIPBLQ6KC79 2804 aaeCLIP11.78□□□□□ -0.52
XRCC3-206ENST00000554170 ANKRD33BA6NCL7 494 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 OR6C70A6NIJ9 312 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 NPIPA5E9PKD4 350 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 ANKRD28O15084 1053 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 NME6O75414 186 aaPredicted RBP11.77□□□□□ -0.53
XRCC3-206ENST00000554170 SLC22A3O75751 556 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 SNX4O95219 450 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 KCNH1O95259 989 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 CPSF4O95639 269 aaKnown RBP11.77□□□□□ -0.53
XRCC3-206ENST00000554170 KRT16P08779 473 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 ALOX5P09917 674 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 GABRA3P34903 492 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 DNASE1L1P49184 302 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 CCT3P49368 545 aaKnown RBP11.77□□□□□ -0.53
XRCC3-206ENST00000554170 PNLIPRP2P54317 469 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 PSG6Q00889 435 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 TLE4Q04727 773 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 LRRC74AQ0VAA2 488 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 DECR1Q16698 335 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 FAM174BQ3ZCQ3 159 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 SPANXN4Q5MJ08 99 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 PRAMEF20Q5VT98 475 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 TMEM198Q66K66 360 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 NPSR1Q6W5P4 371 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 SLC22A16Q86VW1 577 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 SPPL2CQ8IUH8 684 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 MIER2Q8N344 545 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 ACBD4Q8NC06 268 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 OR4A15Q8NGL6 344 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 PSMA8Q8TAA3 256 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 SFXN5Q8TD22 340 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 GPR151Q8TDV0 419 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 SLC9A6Q92581 669 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 FAM120BQ96EK7 910 aaKnown RBP11.77□□□□□ -0.53
XRCC3-206ENST00000554170 CHMP6Q96FZ7 201 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 MARK4Q96L34 752 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 COL21A1Q96P44 957 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 SIKE1Q9BRV8 207 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 CXorf36Q9H7Y0 433 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 IL1RL2Q9HB29 575 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 MCCC2Q9HCC0 563 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 SIRT3Q9NTG7 399 aaPredicted RBP11.77□□□□□ -0.53
XRCC3-206ENST00000554170 FAM120CQ9NX05 1096 aaKnown RBP11.77□□□□□ -0.53
XRCC3-206ENST00000554170 ZIM2Q9NZV7 527 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 CNOT11Q9UKZ1 510 aaKnown RBP11.77□□□□□ -0.53
XRCC3-206ENST00000554170 CBLCQ9ULV8 474 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 BOKQ9UMX3 212 aaPredicted RBP11.77□□□□□ -0.53
XRCC3-206ENST00000554170 NPIPA1Q9UND3 350 aa11.77□□□□□ -0.53
XRCC3-206ENST00000554170 FAF1Q9UNN5 650 aaPredicted RBP11.77□□□□□ -0.53
XRCC3-206ENST00000554170 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.77□□□□□ -0.53
XRCC3-206ENST00000554170 MAP1AP78559 2803 aaPredicted RBP11.77□□□□□ -0.53
XRCC3-206ENST00000554170 ZNF407Q9C0G0 2248 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 DYNC1I1O14576 645 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 HS6ST1O60243 411 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 SOX30O94993 753 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 IL6P05231 212 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 VIMP08670 466 aaKnown RBP11.76□□□□□ -0.53
XRCC3-206ENST00000554170 TROVE2P10155 538 aaKnown RBP eCLIP11.76□□□□□ -0.53
XRCC3-206ENST00000554170 RFC3P40938 356 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 CASP3P42574 277 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 MASP1P48740 699 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 WNT3P56703 355 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 PPIAP62937 165 aaKnown RBP11.76□□□□□ -0.53
XRCC3-206ENST00000554170 HBA1P69905 142 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 IRX1P78414 480 aaPredicted RBP11.76□□□□□ -0.53
XRCC3-206ENST00000554170 GAB1Q13480 694 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 TP53BP2Q13625 1128 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 MFSD12Q6NUT3 480 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 PAOXQ6QHF9 649 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 NCCRP1Q6ZVX7 275 aaPredicted RBP11.76□□□□□ -0.53
XRCC3-206ENST00000554170 PACS2Q86VP3 889 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 CLECL1Q8IZS7 167 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 OR4N2Q8NGD1 307 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 JADE3Q92613 823 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 HGDQ93099 445 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 SLC35A4Q96G79 324 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 POM121Q96HA1 1249 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 JSRP1Q96MG2 331 aaPredicted RBP11.76□□□□□ -0.53
XRCC3-206ENST00000554170 RILPQ96NA2 401 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 ADOQ96SZ5 270 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 EBF4Q9BQW3 602 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 ANGPTL4Q9BY76 406 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 TTTY12Q9BZ98 90 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 ENKD1Q9H0I2 346 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 TSPAN10Q9H1Z9 355 aaPredicted RBP11.76□□□□□ -0.53
XRCC3-206ENST00000554170 NPHS2Q9NP85 383 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 SDR39U1Q9NRG7 319 aaPredicted RBP11.76□□□□□ -0.53
XRCC3-206ENST00000554170 TUBA8Q9NY65 449 aaPredicted RBP11.76□□□□□ -0.53
XRCC3-206ENST00000554170 KLRF1Q9NZS2 232 aa11.76□□□□□ -0.53
XRCC3-206ENST00000554170 PHF3Q92576 2039 aaKnown RBP11.76□□□□□ -0.53
XRCC3-206ENST00000554170 ABCA2Q9BZC7 2435 aa11.75□□□□□ -0.53
XRCC3-206ENST00000554170 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms