RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 HPGDP15428 266 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 ZNF24P17028 368 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 PPIBP23284 216 aaKnown RBP12.71□□□□□ -0.37
TUBB3-202ENST00000553656 MAGEA8P43361 318 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 DNASE1L1P49184 302 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 MLLT10P55197 1068 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 CASP9P55211 416 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 HPCAP84074 193 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 PMP22Q01453 160 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 ALDH6A1Q02252 535 aaKnown RBP12.71□□□□□ -0.37
TUBB3-202ENST00000553656 PRR30Q53SZ7 412 aaPredicted RBP12.71□□□□□ -0.37
TUBB3-202ENST00000553656 DCST2Q5T1A1 773 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 SLC30A6Q6NXT4 461 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 FIGNL1Q6PIW4 674 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 PACS2Q86VP3 889 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 MIPOL1Q8TD10 442 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 HGDQ93099 445 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 ZNF597Q96LX8 424 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 JSRP1Q96MG2 331 aaPredicted RBP12.71□□□□□ -0.37
TUBB3-202ENST00000553656 FRMD6Q96NE9 622 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 PHF12Q96QT6 1004 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 OSBPL11Q9BXB4 747 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 PAIP1Q9H074 479 aaKnown RBP12.71□□□□□ -0.37
TUBB3-202ENST00000553656 TPT1P8Q9HAU6 139 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 OLAHQ9NV23 265 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 ARMCX1Q9P291 453 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 B4GALT7Q9UBV7 327 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 ARL2BPQ9Y2Y0 163 aa12.71□□□□□ -0.37
TUBB3-202ENST00000553656 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.71□□□□□ -0.37
TUBB3-202ENST00000553656 A0A0G2JMM0 328 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 A0A1W2PPB8 328 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 A0A1W2PRS3 328 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 ASPDHA6ND91 283 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 BBIP1A8MTZ0 92 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 KIR3DP1A8MWS1 328 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 TFECO14948 347 aaPredicted RBP12.7□□□□□ -0.38
TUBB3-202ENST00000553656 ICOSLGO75144 302 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 UTS2O95399 124 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 FAM107AO95990 144 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 OR12D1P0DN82 309 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 LCN1P31025 176 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 EVI2BP34910 448 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 MAN2A2P49641 1150 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 TLE1Q04724 770 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 SNTA1Q13424 505 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 NFYCQ13952 458 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.7□□□□□ -0.38
TUBB3-202ENST00000553656 GTDC1Q4AE62 458 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 PAGE3Q5JUK9 113 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 EXOSC6Q5RKV6 272 aaKnown RBP12.7□□□□□ -0.38
TUBB3-202ENST00000553656 LRIF1Q5T3J3 769 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 CCNJQ5T5M9 372 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 GKAP1Q5VSY0 366 aaPredicted RBP12.7□□□□□ -0.38
TUBB3-202ENST00000553656 DHDDSQ86SQ9 333 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 ZNF605Q86T29 641 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 MTDHQ86UE4 582 aaKnown RBP12.7□□□□□ -0.38
TUBB3-202ENST00000553656 SLC22A16Q86VW1 577 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 SNX32Q86XE0 403 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 ZFP62Q8NB50 900 aaPredicted RBP12.7□□□□□ -0.38
TUBB3-202ENST00000553656 ZFP90Q8TF47 636 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 FAR1Q8WVX9 515 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 XAGE5Q8WWM1 108 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 TAAR6Q96RI8 345 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 NODALQ96S42 347 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 CCT8L2Q96SF2 557 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 ANGPTL4Q9BY76 406 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 TBL1XR1Q9BZK7 514 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 SERHL2Q9H4I8 314 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 SLC52A3Q9NQ40 469 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 DEPPQ9NTK1 212 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 ASF1BQ9NVP2 202 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 ABCG2Q9UNQ0 655 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 PCDHB14Q9Y5E9 798 aa12.7□□□□□ -0.38
TUBB3-202ENST00000553656 CHD6Q8TD26 2715 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 TMEM247A6NEH6 219 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 EVPLLA8MZ36 301 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 CLIC1O00299 241 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 SHOX2O60902 331 aaPredicted RBP12.69□□□□□ -0.38
TUBB3-202ENST00000553656 RFC3P40938 356 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 CASP3P42574 277 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 CRATP43155 626 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 STX5Q13190 355 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 CYLC2Q14093 348 aaPredicted RBP12.69□□□□□ -0.38
TUBB3-202ENST00000553656 GPAT3Q53EU6 434 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 BICRALQ6AI39 1079 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 DESI1Q6ICB0 168 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 TMEM81Q6P7N7 255 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 PIGWQ7Z7B1 504 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 GALNT10Q86SR1 603 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 ATCAYQ86WG3 371 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 ZNF527Q8NB42 609 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 PCYOX1LQ8NBM8 494 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 OR52N2Q8NGI0 321 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 FAM110BQ8TC76 370 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 NR4A3Q92570 626 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 RAB8BQ92930 207 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 DTNBP1Q96EV8 351 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 AURKBQ96GD4 344 aaPredicted RBP12.69□□□□□ -0.38
TUBB3-202ENST00000553656 IL1RL2Q9HB29 575 aa12.69□□□□□ -0.38
TUBB3-202ENST00000553656 ZFP64Q9NPA5 681 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms