RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 PRODH2Q9UF12 536 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 PISDQ9UG56 409 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 MAGEL2Q9UJ55 1249 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 RPS6KA6Q9UK32 745 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 MRTO4Q9UKD2 239 aaKnown RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 C19orf53Q9UNZ5 99 aaPredicted RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 LIPT1Q9Y234 373 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 POMPQ9Y244 141 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 FARSAQ9Y285 508 aaKnown RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 MYRFQ9Y2G1 1151 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 PADI2Q9Y2J8 665 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 TMEM184BQ9Y519 407 aaPredicted RBP4.67□□□□□ -1.66
VTI1B-202ENST00000553619 CLCA3PQ9Y6N3 262 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 X6R8D5 127 aa4.67□□□□□ -1.66
VTI1B-202ENST00000553619 TRBV5-3A0A0A0MS03 114 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 RNF103-CHMP3A0A140T963 221 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 PRORSD1PA6NEY8 169 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 VSTM2BA6NLU5 285 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 OR6C76A6NM76 312 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 WASHC1A8K0Z3 465 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 FXYD1O00168 92 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 CXCR6O00574 342 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 NME4O00746 187 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 ASNA1O43681 348 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 DNAJB6O75190 326 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 ALOX12BO75342 701 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 SERPINB7O75635 380 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 STK17BO94768 372 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 KCNK5O95279 499 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 ALOX5P09917 674 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 ICAM2P13598 275 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 CD1EP15812 388 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 EFNA1P20827 205 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-202ENST00000553619 PTPN6P29350 595 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 SLC5A2P31639 672 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 STAT5AP42229 794 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 CDKN2CP42773 168 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 GSK3BP49841 420 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 KHKP50053 298 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 GTF2A1P52655 376 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-202ENST00000553619 PSMD4P55036 377 aaKnown RBP4.66□□□□□ -1.66
VTI1B-202ENST00000553619 GFRA1P56159 465 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 OR4D2P58180 307 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 MTPNP58546 118 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 DSTNP60981 165 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 ACTR3P61158 418 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 AP2B1P63010 937 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 BTG2P78543 158 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 ELF3P78545 371 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-202ENST00000553619 TARDBPQ13148 414 aaKnown RBP eCLIP4.66□□□□□ -1.66
VTI1B-202ENST00000553619 RIPK1Q13546 671 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 CEACAM7Q14002 265 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 ZNF267Q14586 743 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-202ENST00000553619 ELAVL1Q15717 326 aaKnown RBP4.66□□□□□ -1.66
VTI1B-202ENST00000553619 SYT16Q17RD7 645 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 PRSS53Q2L4Q9 553 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 MPEG1Q2M385 716 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 PRICKLE4Q2TBC4 344 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 VWA2Q5GFL6 755 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 RABL3Q5HYI8 236 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 GCNT6Q5T4J0 391 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 PRAMEF17Q5VTA0 474 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 PRAMEF8Q5VWM4 474 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 PRAMEF7Q5VXH5 474 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 REEP3Q6NUK4 255 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 CDC73Q6P1J9 531 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 ZFP1Q6P2D0 407 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 FKBP9P1Q75LS8 142 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 SZRD1Q7Z422 152 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 PATL1Q86TB9 770 aaKnown RBP4.66□□□□□ -1.66
VTI1B-202ENST00000553619 CALHM3Q86XJ0 350 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 RNF130Q86XS8 419 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 ZC3H7AQ8IWR0 971 aaKnown RBP4.66□□□□□ -1.66
VTI1B-202ENST00000553619 NLGN4XQ8N0W4 816 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 MMP21Q8N119 569 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 EID3Q8N140 333 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 Q8N1Y9 231 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 OR2L13Q8N349 312 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 METTL27Q8N6F8 245 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-202ENST00000553619 CDRT4Q8N9R6 151 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 MORN4Q8NDC4 146 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 HIPK4Q8NE63 616 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 NLGN4YQ8NFZ3 816 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-202ENST00000553619 OR52E4Q8NGH9 312 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 OR5L2Q8NGL0 311 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 OR14A16Q8NHC5 309 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 SUN3Q8TAQ9 357 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 PHOSPHO1Q8TCT1 267 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-202ENST00000553619 XAGE5Q8WWM1 108 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 LZICQ8WZA0 190 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 KAT2AQ92830 837 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 UCN3Q969E3 161 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 FAM162AQ96A26 154 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 MAGED4Q96JG8 741 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 LCORQ96JN0 433 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-202ENST00000553619 NSMCE2Q96MF7 247 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 RNF145Q96MT1 663 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 IP6K3Q96PC2 410 aa4.66□□□□□ -1.66
VTI1B-202ENST00000553619 MS4A4EQ96PG1 132 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms