RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 PIGAP37287 484 aa12.73□□□□□ -0.37
APEX1-205ENST00000553555 PCOLCEQ15113 449 aa12.73□□□□□ -0.37
APEX1-205ENST00000553555 EBPQ15125 230 aaKnown RBP12.73□□□□□ -0.37
APEX1-205ENST00000553555 ATP6AP1Q15904 470 aa12.73□□□□□ -0.37
APEX1-205ENST00000553555 IQCCQ4KMZ1 466 aa12.73□□□□□ -0.37
APEX1-205ENST00000553555 SLC29A4Q7RTT9 530 aa12.73□□□□□ -0.37
APEX1-205ENST00000553555 PIWIL3Q7Z3Z3 882 aaKnown RBP12.73□□□□□ -0.37
APEX1-205ENST00000553555 ZNF619Q8N2I2 560 aa12.73□□□□□ -0.37
APEX1-205ENST00000553555 SPPL2AQ8TCT8 520 aa12.73□□□□□ -0.37
APEX1-205ENST00000553555 LCORQ96JN0 433 aaPredicted RBP12.73□□□□□ -0.37
APEX1-205ENST00000553555 QRSL1Q9H0R6 528 aaKnown RBP12.73□□□□□ -0.37
APEX1-205ENST00000553555 NXF5Q9H1B4 397 aaKnown RBP12.73□□□□□ -0.37
APEX1-205ENST00000553555 SEMA6AQ9H2E6 1030 aa12.73□□□□□ -0.37
APEX1-205ENST00000553555 ZNF223Q9UK11 482 aaPredicted RBP12.73□□□□□ -0.37
APEX1-205ENST00000553555 HS3ST3B1Q9Y662 390 aa12.73□□□□□ -0.37
APEX1-205ENST00000553555 EXPH5Q8NEV8 1989 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 PRAMEF25A6NGN4 478 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 STMND1H3BQB6 276 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 CLOCKO15516 846 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 PRKNO60260 465 aaPredicted RBP12.72□□□□□ -0.37
APEX1-205ENST00000553555 RAD1O60671 282 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 LDLRP01130 860 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 IGKV1D-16P01601 117 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 MMP11P24347 488 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 CD82P27701 267 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 RBMS1P29558 406 aaKnown RBP12.72□□□□□ -0.37
APEX1-205ENST00000553555 STAT5AP42229 794 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 SLC26A5P58743 744 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 RPS15P62841 145 aaKnown RBP12.72□□□□□ -0.37
APEX1-205ENST00000553555 VLDLRP98155 873 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 DNASE1L3Q13609 305 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 GPR68Q15743 365 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 NNATQ16517 81 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 CYP27C1Q4G0S4 372 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 ZNF311Q5JNZ3 666 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 HLA-DQA1Q5Y7H0 255 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 HMGN2P46Q86SG4 172 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 BCORP1Q8N888 145 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 ZNF441Q8N8Z8 693 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 OR52P1PQ8NH57 321 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 GEMIN6Q8WXD5 167 aaKnown RBP12.72□□□□□ -0.37
APEX1-205ENST00000553555 VMP1Q96GC9 406 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 CENPNQ96H22 339 aaPredicted RBP12.72□□□□□ -0.37
APEX1-205ENST00000553555 PINK1Q9BXM7 581 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 WWTR1Q9GZV5 400 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 ZNF700Q9H0M5 742 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 IFT52Q9Y366 437 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 OR10H1Q9Y4A9 318 aa12.72□□□□□ -0.37
APEX1-205ENST00000553555 IGHV1-45A0A0A0MS14 117 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 FRG2CA6NGY1 282 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 CDRT15L2A8MXV6 281 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 C21orf140B9A014 251 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 TERTO14746 1132 aaKnown RBP12.71□□□□□ -0.37
APEX1-205ENST00000553555 KIAA0513O60268 411 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 DEAF1O75398 565 aaPredicted RBP12.71□□□□□ -0.37
APEX1-205ENST00000553555 CST1P01037 141 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 CAPNS1P04632 268 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 FABP3P05413 133 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 TNFRSF1BP20333 461 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 OR1E2P47887 323 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 RPS18P62269 152 aaKnown RBP12.71□□□□□ -0.37
APEX1-205ENST00000553555 RNF4P78317 190 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 PUM1Q14671 1186 aaKnown RBP eCLIP12.71□□□□□ -0.372e-6■■■■□ 20.9
APEX1-205ENST00000553555 SSPNQ14714 243 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 TRIP10Q15642 601 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 RSPO4Q2I0M5 234 aaPredicted RBP12.71□□□□□ -0.37
APEX1-205ENST00000553555 LPCAT4Q643R3 524 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 IGF2-ASQ6U949 168 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 HSDL2Q6YN16 418 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 TSEN54Q7Z6J9 526 aaKnown RBP12.71□□□□□ -0.37
APEX1-205ENST00000553555 ZAR1Q86SH2 424 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 VRK2Q86Y07 508 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 PEX5LQ8IYB4 626 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 APOBEC4Q8WW27 367 aaKnown RBP12.71□□□□□ -0.37
APEX1-205ENST00000553555 PROX1Q92786 737 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 ZNF354BQ96LW1 612 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 GAL3ST4Q96RP7 486 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 G6PC3Q9BUM1 346 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 GPR87Q9BY21 358 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 FAM117AQ9C073 453 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 TRIM45Q9H8W5 580 aaPredicted RBP12.71□□□□□ -0.37
APEX1-205ENST00000553555 DNAJB9Q9UBS3 223 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 KCNE5Q9UJ90 142 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 SH3GLB1Q9Y371 365 aa12.71□□□□□ -0.37
APEX1-205ENST00000553555 LOC101059948A0A1B0GTJ6 334 aa12.7□□□□□ -0.38
APEX1-205ENST00000553555 A0A1W2PQ72 361 aa12.7□□□□□ -0.38
APEX1-205ENST00000553555 AGAP5A6NIR3 686 aa12.7□□□□□ -0.38
APEX1-205ENST00000553555 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.7□□□□□ -0.38
APEX1-205ENST00000553555 hCG_2039718K7EN88 272 aa12.7□□□□□ -0.38
APEX1-205ENST00000553555 SOCS6O14544 535 aa12.7□□□□□ -0.38
APEX1-205ENST00000553555 TO15178 435 aa12.7□□□□□ -0.38
APEX1-205ENST00000553555 PRSS23O95084 383 aa12.7□□□□□ -0.38
APEX1-205ENST00000553555 EPPINO95925 133 aa12.7□□□□□ -0.38
APEX1-205ENST00000553555 LGI1O95970 557 aa12.7□□□□□ -0.38
APEX1-205ENST00000553555 DBIP07108 87 aaKnown RBP12.7□□□□□ -0.38
APEX1-205ENST00000553555 COX6A1P12074 109 aa12.7□□□□□ -0.38
APEX1-205ENST00000553555 ATP6V1C1P21283 382 aa12.7□□□□□ -0.38
APEX1-205ENST00000553555 RPS4Y1P22090 263 aaKnown RBP12.7□□□□□ -0.38
APEX1-205ENST00000553555 F8A1P23610 371 aa12.7□□□□□ -0.38
APEX1-205ENST00000553555 PRKAR1BP31321 381 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms