RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 MAPK10P53779 464 aa14.31□□□□□ -0.12
ABCD4-218ENST00000553486 GP2P55259 537 aaKnown RBP14.31□□□□□ -0.12
ABCD4-218ENST00000553486 RAB38P57729 211 aa14.31□□□□□ -0.12
ABCD4-218ENST00000553486 ZNF628Q5EBL2 1059 aa14.31□□□□□ -0.12
ABCD4-218ENST00000553486 DHRS4L2Q6PKH6 230 aa14.31□□□□□ -0.12
ABCD4-218ENST00000553486 COMTD1Q86VU5 262 aa14.31□□□□□ -0.12
ABCD4-218ENST00000553486 ANKRD13BQ86YJ7 626 aa14.31□□□□□ -0.12
ABCD4-218ENST00000553486 SLC16A11Q8NCK7 471 aa14.31□□□□□ -0.12
ABCD4-218ENST00000553486 C1orf216Q8TAB5 229 aa14.31□□□□□ -0.12
ABCD4-218ENST00000553486 ZCCHC14Q8WYQ9 949 aaKnown RBP14.31□□□□□ -0.12
ABCD4-218ENST00000553486 SLC9A6Q92581 669 aa14.31□□□□□ -0.12
ABCD4-218ENST00000553486 ARHGDIGQ99819 225 aa14.31□□□□□ -0.12
ABCD4-218ENST00000553486 BCL7BQ9BQE9 202 aa14.31□□□□□ -0.12
ABCD4-218ENST00000553486 COPS4Q9BT78 406 aa14.31□□□□□ -0.12
ABCD4-218ENST00000553486 DCUN1D5Q9BTE7 237 aa14.31□□□□□ -0.12
ABCD4-218ENST00000553486 FUNDC2Q9BWH2 189 aa14.31□□□□□ -0.12
ABCD4-218ENST00000553486 MTHFD2LQ9H903 347 aaPredicted RBP14.31□□□□□ -0.12
ABCD4-218ENST00000553486 PSORS1C1Q9UIG5 152 aa14.31□□□□□ -0.12
ABCD4-218ENST00000553486 RALYQ9UKM9 306 aaKnown RBP14.31□□□□□ -0.12
ABCD4-218ENST00000553486 IFT52Q9Y366 437 aa14.31□□□□□ -0.12
ABCD4-218ENST00000553486 ANKRD11Q6UB99 2663 aaPredicted RBP14.3□□□□□ -0.12
ABCD4-218ENST00000553486 CLCA1A8K7I4 914 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 FAM227AF5H4B4 570 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 SRPX2O60687 465 aaPredicted RBP14.3□□□□□ -0.12
ABCD4-218ENST00000553486 NT5EP21589 574 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 POU1F1P28069 291 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 SKP1P63208 163 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 COX10Q12887 443 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 TARDBPQ13148 414 aaKnown RBP eCLIP14.3□□□□□ -0.12
ABCD4-218ENST00000553486 NDUFA9Q16795 377 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 ARHGAP11BQ3KRB8 267 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 SYT6Q5T7P8 510 aaPredicted RBP14.3□□□□□ -0.12
ABCD4-218ENST00000553486 PGBD2Q6P3X8 592 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 ZCCHC12Q6PEW1 402 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 PODNL1Q6PEZ8 512 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 CCDC81Q6ZN84 652 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 HMGN2P46Q86SG4 172 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 MCATQ8IVS2 390 aaKnown RBP14.3□□□□□ -0.12
ABCD4-218ENST00000553486 CCDC103Q8IW40 242 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 DNAJC22Q8N4W6 341 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 OR52P1PQ8NH57 321 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 SLC7A13Q8TCU3 470 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 CDS1Q92903 461 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 SIGLEC11Q96RL6 698 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 POLR2J3Q9H1A7 115 aaKnown RBP14.3□□□□□ -0.12
ABCD4-218ENST00000553486 FAM60AQ9NP50 221 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 ACOT13Q9NPJ3 140 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 STARD5Q9NSY2 213 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 REV1Q9UBZ9 1251 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 ZNF232Q9UNY5 417 aa14.3□□□□□ -0.12
ABCD4-218ENST00000553486 A0A1W2PPW3 197 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 SH3D21A4FU49 640 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 LILRA5A6NI73 299 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 SLC9B1P1A6NJY1 282 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 FGF17O60258 216 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 PLOD3O60568 738 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 LDB3O75112 727 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 NME6O75414 186 aaPredicted RBP14.29□□□□□ -0.12
ABCD4-218ENST00000553486 CER1O95813 267 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 FADS2O95864 444 aaKnown RBP14.29□□□□□ -0.12
ABCD4-218ENST00000553486 MASP1P48740 699 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 ST13P50502 369 aaKnown RBP14.29□□□□□ -0.12
ABCD4-218ENST00000553486 PDX1P52945 283 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 ID2Q02363 134 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 NFATC3Q12968 1075 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 FHL5Q5TD97 284 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 NIPAL1Q6NVV3 410 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 WDR53Q7Z5U6 358 aaPredicted RBP14.29□□□□□ -0.12
ABCD4-218ENST00000553486 VRK2Q86Y07 508 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 PEX5LQ8IYB4 626 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 OR5T3Q8NGG3 340 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 ZNF675Q8TD23 568 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 FCGR1BQ92637 280 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 GGHQ92820 318 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 FKBP10Q96AY3 582 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 TCTN2Q96GX1 697 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 SLC38A3Q99624 504 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 RHNO1Q9BSD3 238 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 QRSL1Q9H0R6 528 aaKnown RBP14.29□□□□□ -0.12
ABCD4-218ENST00000553486 PIGUQ9H490 435 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 GAREM1Q9H706 876 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 CLN6Q9NWW5 311 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 ENPP5Q9UJA9 477 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 WDR45Q9Y484 360 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 ITPR1Q14643 2758 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 SGK494L7N484 410 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 CBFA2T3O75081 653 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 ALOX5P09917 674 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 ZNF883P0CG24 379 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 ACVR2AP27037 513 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 AFF3P51826 1226 aaKnown RBP14.29□□□□□ -0.12
ABCD4-218ENST00000553486 TAS2R41P59536 307 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 BNC1Q01954 994 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 ALDH6A1Q02252 535 aaKnown RBP14.29□□□□□ -0.12
ABCD4-218ENST00000553486 INAVAQ3KP66 663 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 TRMT12Q53H54 448 aaKnown RBP14.29□□□□□ -0.12
ABCD4-218ENST00000553486 TMEM236Q5W0B7 351 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 CD300LDQ6UXZ3 194 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 FRRS1Q6ZNA5 592 aa14.29□□□□□ -0.12
ABCD4-218ENST00000553486 PTCHD4Q6ZW05 846 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms