RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 HBMQ6B0K9 141 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 OR4C11Q6IEV9 310 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 TMEM107Q6UX40 140 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 B3GLCTQ6Y288 498 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 NRTNQ99748 197 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 SEMA4GQ9NTN9 838 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 SYT5O00445 386 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 M6PRP20645 277 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 CCR2P41597 374 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 STAT5AP42229 794 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 SSR2P43308 183 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 FCN2Q15485 313 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 WDR45BQ5MNZ6 344 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 BCL2L15Q5TBC7 163 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 TMEM64Q6YI46 380 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 C11orf96Q7Z7L8 435 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 DIO2Q92813 273 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 FAIM2Q9BWQ8 316 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 PCBD2Q9H0N5 130 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 TDP1Q9NUW8 608 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 IMP3Q9NV31 184 aaKnown RBP16.45■□□□□ 0.22
SYNE3-202ENST00000553340 ZFR2Q9UPR6 939 aaKnown RBP16.45■□□□□ 0.22
SYNE3-202ENST00000553340 PRKAB1Q9Y478 270 aa16.45■□□□□ 0.22
SYNE3-202ENST00000553340 KIAA0355O15063 1070 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 FRS3O43559 492 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 RNF13O43567 381 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 ERGP11308 486 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 PSMB5P28074 263 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 RNF144AP50876 292 aaPredicted RBP16.44■□□□□ 0.22
SYNE3-202ENST00000553340 AP2S1P53680 142 aaPredicted RBP16.44■□□□□ 0.22
SYNE3-202ENST00000553340 WASH2PQ6VEQ5 465 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 ANKRD19PQ9H560 264 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 ENAMQ9NRM1 1142 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 IL20Q9NYY1 176 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 A0A0A6YYD5 115 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 SPINT1O43278 529 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 LANCL1O43813 399 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 SERPIND1P05546 499 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 FPR3P25089 353 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 PTGER1P34995 402 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 BDH1Q02338 343 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 PGGHGQ32M88 737 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 PIP5KL1Q5T9C9 394 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 PRAMEF8Q5VWM4 474 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 PRAMEF7Q5VXH5 474 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 ZNF765Q7L2R6 523 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 NR2C2APQ86WQ0 139 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 BBS1Q8NFJ9 593 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 ZNF431Q8TF32 576 aaPredicted RBP16.44■□□□□ 0.22
SYNE3-202ENST00000553340 GPR137Q96N19 417 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 ARHGDIGQ99819 225 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 JAM3Q9BX67 310 aa16.44■□□□□ 0.22
SYNE3-202ENST00000553340 PITHD1Q9GZP4 211 aaPredicted RBP16.44■□□□□ 0.22
SYNE3-202ENST00000553340 RANBP3Q9H6Z4 567 aaPredicted RBP16.44■□□□□ 0.22
SYNE3-202ENST00000553340 HMX1Q9NP08 348 aaPredicted RBP16.44■□□□□ 0.22
SYNE3-202ENST00000553340 DVL2O14641 736 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 SHOXO15266 292 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 VEGFDO43915 354 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 ERAL1O75616 437 aaKnown RBP16.43■□□□□ 0.22
SYNE3-202ENST00000553340 NTN1O95631 604 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 RBMS1P29558 406 aaKnown RBP16.43■□□□□ 0.22
SYNE3-202ENST00000553340 HSD17B2P37059 387 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 RFX3P48380 749 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 TMCO2Q7Z6W1 182 aaPredicted RBP16.43■□□□□ 0.22
SYNE3-202ENST00000553340 SFXN5Q8TD22 340 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 ACOT11Q8WXI4 607 aaPredicted RBP16.43■□□□□ 0.22
SYNE3-202ENST00000553340 KLK6Q92876 244 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 KCTD12Q96CX2 325 aaKnown RBP16.43■□□□□ 0.22
SYNE3-202ENST00000553340 MAP6Q96JE9 813 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 C17orf62Q9BQA9 187 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 OSGEPL1Q9H4B0 414 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 CACNG2Q9Y698 323 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 CSNK1G3Q9Y6M4 447 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 GLOD5A6NK44 160 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 RPN2P04844 631 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 C6P13671 934 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 LAG3P18627 525 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 STOMP27105 288 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 PITPNBP48739 271 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 METAP1P53582 386 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 PER3P56645 1201 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 RPA4Q13156 261 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 SMARCD3Q6STE5 483 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 FCRL4Q96PJ5 515 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 ISG20L2Q9H9L3 353 aaKnown RBP16.43■□□□□ 0.22
SYNE3-202ENST00000553340 MAT2BQ9NZL9 334 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 MARK1Q9P0L2 795 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 PRKAG2Q9UGJ0 569 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 MGAT4AQ9UM21 535 aa16.43■□□□□ 0.22
SYNE3-202ENST00000553340 GPR55Q9Y2T6 319 aaPredicted RBP16.43■□□□□ 0.22
SYNE3-202ENST00000553340 RFXAPO00287 272 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 MAN2B1O00754 1011 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 PPM1DO15297 605 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 CCL16O15467 120 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 LILRB3O75022 631 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 PRKRAO75569 313 aaKnown RBP16.42■□□□□ 0.22
SYNE3-202ENST00000553340 ALPPL2P10696 532 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 POU3F3P20264 500 aaPredicted RBP16.42■□□□□ 0.22
SYNE3-202ENST00000553340 AHCYP23526 432 aa16.42■□□□□ 0.22
SYNE3-202ENST00000553340 ACSL1P33121 698 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms