RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 C2orf16Q68DN1 1984 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 ARRDC5A6NEK1 342 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 CPSF4LA6NMK7 179 aaKnown RBP11.61□□□□□ -0.55
HDAC7-230ENST00000552960 NPC1O15118 1278 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 SLC43A1O75387 559 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 KLHL18O94889 574 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 C1orf105O95561 183 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 SOD1P00441 154 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 HLA-DPB1P04440 258 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 ADH5P11766 374 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 C3orf38Q5JPI3 329 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 FAM27D1Q5T7N8 215 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 NXPE4Q6UWF7 544 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 SLC36A4Q6YBV0 504 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 DUSP18Q8NEJ0 188 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 OR51G2Q8NGK0 314 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 ZFP3Q96NJ6 502 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 MARVELD1Q9BSK0 173 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 OR51I1Q9H343 314 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 ZCCHC3Q9NUD5 404 aaKnown RBP11.61□□□□□ -0.55
HDAC7-230ENST00000552960 TAS2R7Q9NYW3 318 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 H2AFY2Q9P0M6 372 aaPredicted RBP11.61□□□□□ -0.55
HDAC7-230ENST00000552960 SLC13A4Q9UKG4 626 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 ASF1AQ9Y294 204 aa11.61□□□□□ -0.55
HDAC7-230ENST00000552960 FAM170BA6NMN3 283 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 MMP20O60882 483 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 B4GALT2O60909 372 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 PRKRAO75569 313 aaKnown RBP11.6□□□□□ -0.55
HDAC7-230ENST00000552960 RFPL3O75679 317 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 PDGFAP04085 211 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 TP53P04637 393 aaPredicted RBP11.6□□□□□ -0.55
HDAC7-230ENST00000552960 SRPRAP08240 638 aaKnown RBP11.6□□□□□ -0.55
HDAC7-230ENST00000552960 PPP2R1BP30154 601 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 SLC1A3P43003 542 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 ZNF81P51508 661 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 TAP2Q03519 686 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 DLX2Q07687 328 aaPredicted RBP11.6□□□□□ -0.55
HDAC7-230ENST00000552960 TPBGQ13641 420 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 PDE7AQ13946 482 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 GAB4Q2WGN9 574 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 BBS1Q8NFJ9 593 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 SMPDL3AQ92484 453 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 GLYATL1Q969I3 302 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 KIAA1143Q96AT1 154 aaPredicted RBP11.6□□□□□ -0.55
HDAC7-230ENST00000552960 ASB16Q96NS5 453 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 SLC38A2Q96QD8 506 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 THAP7Q9BT49 309 aaPredicted RBP11.6□□□□□ -0.55
HDAC7-230ENST00000552960 CDH10Q9Y6N8 788 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 ATG2AQ2TAZ0 1938 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 DHFRP00374 187 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 RB1P06400 928 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 RPL6Q02878 288 aaKnown RBP11.6□□□□□ -0.55
HDAC7-230ENST00000552960 RAB40BQ12829 278 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 LASP1Q14847 261 aaKnown RBP11.6□□□□□ -0.55
HDAC7-230ENST00000552960 ZBTB37Q5TC79 503 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 ZDHHC20Q5W0Z9 365 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 BICRALQ6AI39 1079 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 SMARCD3Q6STE5 483 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 PLEKHM3Q6ZWE6 761 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 KIF18BQ86Y91 864 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 C9orf62Q8N4C0 152 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 APOBEC4Q8WW27 367 aaKnown RBP11.6□□□□□ -0.55
HDAC7-230ENST00000552960 KAT2AQ92830 837 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 NEURL3Q96EH8 262 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 MTIF3Q9H2K0 278 aaKnown RBP11.6□□□□□ -0.55
HDAC7-230ENST00000552960 ADAM30Q9UKF2 790 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 A0A1W2PPK0 400 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 PLPP1O14494 284 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 PPM1DO15297 605 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 NUPL2O15504 423 aaKnown RBP11.6□□□□□ -0.55
HDAC7-230ENST00000552960 SLC22A5O76082 557 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 SLC2A10O95528 541 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 ELFN1P0C7U0 828 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 ENPP1P22413 925 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 NNMTP40261 264 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 GPR4P46093 362 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 ATP12AP54707 1039 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 NTRK2Q16620 822 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 LUZP2Q86TE4 346 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 ZNF680Q8NEM1 530 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 ZFPM2Q8WW38 1151 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 ARHGAP9Q9BRR9 750 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 ZC4H2Q9NQZ6 224 aa11.6□□□□□ -0.55
HDAC7-230ENST00000552960 IMP3Q9NV31 184 aaKnown RBP11.6□□□□□ -0.55
HDAC7-230ENST00000552960 TRIOBPQ9H2D6 2365 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 ZC3H12DA2A288 527 aaKnown RBP11.59□□□□□ -0.55
HDAC7-230ENST00000552960 C8orf89P0DMQ9 161 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 GNSP15586 552 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 DDX6P26196 483 aaKnown RBP eCLIP11.59□□□□□ -0.55
HDAC7-230ENST00000552960 SOX9P48436 509 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 DUSP6Q16828 381 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 PRICKLE2Q7Z3G6 844 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 ADGRF3Q8IZF5 1079 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 FBXL6Q8N531 539 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 ZNF655Q8N720 491 aaPredicted RBP11.59□□□□□ -0.55
HDAC7-230ENST00000552960 OR8D4Q8NGM9 314 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 DNAJA4Q8WW22 397 aaPredicted RBP11.59□□□□□ -0.55
HDAC7-230ENST00000552960 RFT1Q96AA3 541 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 CHFRQ96EP1 664 aa11.59□□□□□ -0.55
HDAC7-230ENST00000552960 SLC35G5Q96KT7 338 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms