RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 RCAN2Q14206 197 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 FBXW10Q5XX13 1052 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 GALNT18Q6P9A2 607 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 ANGPTL8Q6UXH0 198 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 CXorf67Q86X51 503 aaPredicted RBP10.77□□□□□ -0.69
CKAP4-202ENST00000552828 DDIASQ8IXT1 998 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 AGR3Q8TD06 166 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 WNT2BQ93097 391 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 TM4SF18Q96CE8 201 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 METTL2AQ96IZ6 378 aaKnown RBP10.77□□□□□ -0.69
CKAP4-202ENST00000552828 TM9SF2Q99805 663 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 SMR3AQ99954 134 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 TUBA1CQ9BQE3 449 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 YIPF4Q9BSR8 244 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 G6PC3Q9BUM1 346 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 FAIM2Q9BWQ8 316 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 RBM24Q9BX46 236 aaKnown RBP10.77□□□□□ -0.69
CKAP4-202ENST00000552828 PFDN4Q9NQP4 134 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 SIRT5Q9NXA8 310 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 ZNF639Q9UID6 485 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 ZDHHC2Q9UIJ5 367 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 EXO1Q9UQ84 846 aaKnown RBP10.77□□□□□ -0.69
CKAP4-202ENST00000552828 CFL2Q9Y281 166 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 DTX4Q9Y2E6 619 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.77□□□□□ -0.69
CKAP4-202ENST00000552828 JMJD1CQ15652 2540 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 C1orf226A1L170 272 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 HMGB1P1B2RPK0 211 aaPredicted RBP10.76□□□□□ -0.69
CKAP4-202ENST00000552828 TMEM233B4DJY2 109 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 NPIPB8E9PQR5 432 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 GNB5O14775 395 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 ACOX3O15254 700 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 ITM2AO43736 263 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 ICOSLGO75144 302 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 SEC22BO75396 215 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 ERN1O75460 977 aaKnown RBP10.76□□□□□ -0.69
CKAP4-202ENST00000552828 LYPLA1O75608 230 aaPredicted RBP10.76□□□□□ -0.69
CKAP4-202ENST00000552828 CBR3O75828 277 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 ATP1B1P05026 303 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 ANXA4P09525 319 aaPredicted RBP10.76□□□□□ -0.69
CKAP4-202ENST00000552828 LINC00032P0C843 101 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 PRPH2P23942 346 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 TIA1P31483 386 aaKnown RBP eCLIP10.76□□□□□ -0.69
CKAP4-202ENST00000552828 GCKP35557 465 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 GSTM5P46439 218 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 SLC1A6P48664 564 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 GFRA1P56159 465 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 EEF1A1P68104 462 aaKnown RBP10.76□□□□□ -0.69
CKAP4-202ENST00000552828 RAE1P78406 368 aaKnown RBP10.76□□□□□ -0.69
CKAP4-202ENST00000552828 TOMM20Q15388 145 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 PRICKLE4Q2TBC4 344 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 UGT3A2Q3SY77 523 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 TTMPQ5BVD1 217 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 EEF1A1P5Q5VTE0 462 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 SHEQ5VZ18 495 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 YRDCQ86U90 279 aaKnown RBP10.76□□□□□ -0.69
CKAP4-202ENST00000552828 TRIM42Q8IWZ5 723 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 PRR22Q8IZ63 422 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 KIRREL3Q8IZU9 778 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 VWA5B2Q8N398 1253 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 WDSUB1Q8N9V3 476 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 FAM76AQ8TAV0 307 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 TWIST2Q8WVJ9 160 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 CTHRC1Q96CG8 243 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 ARSGQ96EG1 525 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 C11orf24Q96F05 449 aaPredicted RBP10.76□□□□□ -0.69
CKAP4-202ENST00000552828 NODALQ96S42 347 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 CCT7Q99832 543 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 OR2B2Q9GZK3 357 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 PIGMQ9H3S5 423 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 TUBB1Q9H4B7 451 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 METTL7AQ9H8H3 244 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 LRTM1Q9HBL6 345 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 C1orf109Q9NX04 203 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 GALNT8Q9NY28 637 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 PSME2Q9UL46 239 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 RAP2CQ9Y3L5 183 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 CCL27Q9Y4X3 112 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 PCDHA9Q9Y5H5 950 aa10.76□□□□□ -0.69
CKAP4-202ENST00000552828 MPDZO75970 2070 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 ZANQ9Y493 2812 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 SH3D21A4FU49 640 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 A8MXE2 369 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 PIP5K1BO14986 540 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 TO15178 435 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 NT5EP21589 574 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 DRD5P21918 477 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 CHMP24386 653 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 RPL14P50914 215 aaKnown RBP10.75□□□□□ -0.69
CKAP4-202ENST00000552828 NKX6-1P78426 367 aaPredicted RBP10.75□□□□□ -0.69
CKAP4-202ENST00000552828 BST1Q10588 318 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 GAB1Q13480 694 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 HEPACAMQ14CZ8 416 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 C6orf163Q5TEZ5 329 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 ATG16L1Q676U5 607 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 DESI1Q6ICB0 168 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 NOXRED1Q6NXP6 359 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 SLC48A1Q6P1K1 146 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 ENPP6Q6UWR7 440 aa10.75□□□□□ -0.69
CKAP4-202ENST00000552828 Q6ZSR9 355 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms