RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 HPCAL4Q9UM19 191 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 MYO6Q9UM54 1294 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 CCL27Q9Y4X3 112 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 MYO7BQ6PIF6 2116 aa2.18□□□□□ -2.06
CPSF6-207ENST00000551516 SONP18583 2426 aaKnown RBP2.18□□□□□ -2.06
CPSF6-207ENST00000551516 MGAM2Q2M2H8 2515 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 A0A0U1RQJ8 604 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 TRBC2A0A5B9 178 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 HEATR9A2RTY3 570 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 SLC9B1P1A6NJY1 282 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 KCNK1O00180 336 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 SLC16A5O15375 505 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 NDUFS4O43181 175 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 PLPP2O43688 288 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 DPM1O60762 260 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 KCNJ13O60928 360 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 DNAJB6O75190 326 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 NDUFS7O75251 213 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 ALOX12BO75342 701 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 GAGE7O76087 117 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 TOXO94900 526 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 ZBTB11O95625 1053 aaPredicted RBP2.17□□□□□ -2.06
CPSF6-207ENST00000551516 MT-ND3P03897 115 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 PRSS2P07478 247 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 CCDC175P0C221 793 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 PIRTP0C851 137 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 GAGE12FP0CL80 117 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 GAGE12GP0CL81 117 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 GAGE12IP0CL82 117 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 ERGP11308 486 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 PVRP15151 417 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 TNFRSF1BP20333 461 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 FBLP22087 321 aaKnown RBP2.17□□□□□ -2.06
CPSF6-207ENST00000551516 CPT2P23786 658 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 PTPN3P26045 913 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 CD86P42081 329 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 CDKN2BP42772 138 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 CA7P43166 264 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 NR4A2P43354 598 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 PRLHRP49683 370 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 COMPP49747 757 aaPredicted RBP2.17□□□□□ -2.06
CPSF6-207ENST00000551516 TNFSF10P50591 281 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF140P52738 457 aaPredicted RBP2.17□□□□□ -2.06
CPSF6-207ENST00000551516 PPP5CP53041 499 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 RAD23AP54725 363 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 CSE1LP55060 971 aaKnown RBP2.17□□□□□ -2.06
CPSF6-207ENST00000551516 CDH6P55285 790 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 DLX5P56178 289 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 KCNK10P57789 538 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 SEC61BP60468 96 aaKnown RBP2.17□□□□□ -2.06
CPSF6-207ENST00000551516 SIRPAP78324 504 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 ABATP80404 500 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 PDE1BQ01064 536 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 ACY1Q03154 408 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 ACVR1Q04771 509 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 KRTAP1-1Q07627 177 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 GAGE1Q13065 139 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 GAGE4Q13068 117 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 SLC1A5Q15758 541 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 EFNB3Q15768 340 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 DECR1Q16698 335 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 ODF3L2Q3SX64 289 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 NKAIN1Q4KMZ8 207 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 FAM98BQ52LJ0 330 aaKnown RBP2.17□□□□□ -2.06
CPSF6-207ENST00000551516 TEX44Q53QW1 395 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 HSP90AA4PQ58FG1 418 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 ANKRD20A8PQ5CZ79 823 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 ARMC4Q5T2S8 1044 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 GPRC6AQ5T6X5 926 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 ZDHHC20Q5W0Z9 365 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 CST9LP1Q5W188 147 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 NSUN5P2Q63ZY6 315 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 C18orf63Q68DL7 685 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 C11orf87Q6NUJ2 197 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 FAM122CQ6P4D5 195 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 WDR73Q6P4I2 378 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 DOK6Q6PKX4 331 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 TMEM205Q6UW68 189 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 CAMKMTQ7Z624 323 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 FJX1Q86VR8 437 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 GALNT13Q8IUC8 556 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 RYBPQ8N488 228 aaPredicted RBP2.17□□□□□ -2.06
CPSF6-207ENST00000551516 AMER3Q8N944 861 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 TC2NQ8N9U0 490 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 LMNTD1Q8N9Z9 388 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 MDS2Q8NDY4 140 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 THAP6Q8TBB0 222 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 UTP15Q8TED0 518 aaKnown RBP2.17□□□□□ -2.06
CPSF6-207ENST00000551516 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.17□□□□□ -2.06
CPSF6-207ENST00000551516 NR4A3Q92570 626 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 RND1Q92730 232 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 TAAR8Q969N4 342 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 KIAA1143Q96AT1 154 aaPredicted RBP2.17□□□□□ -2.06
CPSF6-207ENST00000551516 VPS33AQ96AX1 596 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 GRAMD2BQ96HH9 432 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 ELMO2Q96JJ3 720 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 C10orf90Q96M02 699 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 QRFPRQ96P65 431 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 RNF157Q96PX1 679 aa2.17□□□□□ -2.06
CPSF6-207ENST00000551516 OR1F2PQ96R84 312 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms