RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 TFAP2AP05549 437 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 LAMP1P11279 417 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 CD36P16671 472 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 HK1P19367 917 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 SLC35F1Q5T1Q4 408 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 CES4AQ5XG92 561 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 USP43Q70EL4 1123 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 MAMDC2Q7Z304 686 aaPredicted RBP11.49□□□□□ -0.57
NR4A1-215ENST00000550557 RSC1A1Q92681 617 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 SGTBQ96EQ0 304 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 COPS4Q9BT78 406 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 SORBS1Q9BX66 1292 aaKnown RBP11.49□□□□□ -0.57
NR4A1-215ENST00000550557 GPC6Q9Y625 555 aaPredicted RBP11.49□□□□□ -0.57
NR4A1-215ENST00000550557 A0A075B6Q4 140 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 FTCDNL1E5RQL4 147 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 K7ESM1 405 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 HPRP00739 348 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 F10P00742 488 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 RPS17P08708 135 aaKnown RBP11.49□□□□□ -0.57
NR4A1-215ENST00000550557 HOXC8P31273 242 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 DCAF7P61962 342 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 BCL7AQ4VC05 210 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 AQP11Q8NBQ7 271 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 NAXEQ8NCW5 288 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 OR8J3Q8NGG0 315 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 KCNE4Q8WWG9 221 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 PATE1Q8WXA2 126 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 NKD1Q969G9 470 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 CDH20Q9HBT6 801 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 A0A1B0GVI7 797 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 KLRC4-KLRK1H3BQV0 150 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 DIRAS1O95057 198 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 OR1E2P47887 323 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 PPP1R8Q12972 351 aaKnown RBP11.49□□□□□ -0.57
NR4A1-215ENST00000550557 IQCCQ4KMZ1 466 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 HENMT1Q5T8I9 393 aaKnown RBP11.49□□□□□ -0.57
NR4A1-215ENST00000550557 PJA1Q8NG27 643 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 GAL3ST1Q99999 423 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 CLEC4AQ9UMR7 237 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 COL11A1P12107 1806 aaPredicted RBP11.49□□□□□ -0.57
NR4A1-215ENST00000550557 ZDBF2Q9HCK1 2354 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 SULT2B1O00204 365 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 ARHGEF15O94989 841 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 IRF2P14316 349 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 DDCP20711 480 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 RAB38P57729 211 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 ALG10BQ5I7T1 473 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 OR52R1Q8NGF1 315 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 CPNE2Q96FN4 548 aaPredicted RBP11.49□□□□□ -0.57
NR4A1-215ENST00000550557 DIRAS2Q96HU8 199 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 ATOH8Q96SQ7 321 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 NGBQ9NPG2 151 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 FAIMQ9NVQ4 179 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 SCN1AP35498 2009 aa11.49□□□□□ -0.57
NR4A1-215ENST00000550557 RBBP6Q7Z6E9 1792 aaKnown RBP11.49□□□□□ -0.57
NR4A1-215ENST00000550557 SCN4AP35499 1836 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 TCRBV3S1A0A5B6 114 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 LMO7DNF2Z398 122 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 FOXE1O00358 373 aaPredicted RBP11.48□□□□□ -0.57
NR4A1-215ENST00000550557 GGT2P36268 569 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 SLC6A8P48029 635 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 DPTQ07507 201 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 CTSL3PQ5NE16 218 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 LETMD1Q6P1Q0 360 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 NECAB3Q96P71 396 aaPredicted RBP11.48□□□□□ -0.57
NR4A1-215ENST00000550557 CHRDQ9H2X0 955 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 TRPV5Q9NQA5 729 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 TAS2R7Q9NYW3 318 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 TNFRSF10DQ9UBN6 386 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 POLHQ9Y253 713 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 POLR2AP24928 1970 aaKnown RBP11.48□□□□□ -0.57
NR4A1-215ENST00000550557 CAPN3P20807 821 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 TAP2Q03519 686 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 VMACQ2NL98 169 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 DEFB109BQ30KR1 87 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 SLC36A3Q495N2 470 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 PRAMEF8Q5VWM4 474 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 PRAMEF7Q5VXH5 474 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 FOXB2Q5VYV0 432 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 UEVLDQ8IX04 471 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 KIAA1958Q8N8K9 716 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 SP7Q8TDD2 431 aaPredicted RBP11.48□□□□□ -0.57
NR4A1-215ENST00000550557 OSTF1Q92882 214 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 ANHXE9PGG2 379 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 H3BUI4 141 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 BOLA2-SMG1P6H3BVE0 249 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 ZNF701M0R085 212 aaPredicted RBP11.48□□□□□ -0.57
NR4A1-215ENST00000550557 MTRF1O75570 445 aaKnown RBP11.48□□□□□ -0.57
NR4A1-215ENST00000550557 KCNK5O95279 499 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 SPARCP09486 303 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 BMP4P12644 408 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 TRIP6Q15654 476 aaKnown RBP11.48□□□□□ -0.57
NR4A1-215ENST00000550557 METRNLQ641Q3 311 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 TFAP2CQ92754 450 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 ERMAPQ96PL5 475 aaPredicted RBP11.48□□□□□ -0.57
NR4A1-215ENST00000550557 TSPAN9O75954 239 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 GPX3P22352 226 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 SLC19A1P41440 591 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 EPHA5P54756 1037 aa11.48□□□□□ -0.57
NR4A1-215ENST00000550557 FOXA1P55317 472 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms