RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	FFAR1	O14842	300 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	PFDN1	O60925	122 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	COQ9	O75208	318 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	CYP7B1	O75881	506 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	C1QL1	O75973	258 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	SNX4	O95219	450 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	DBI	P07108	87 aa	Known RBP	11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	ENDOU	P21128	410 aa	Known RBP	11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	PEBP1	P30086	187 aa	Known RBP	11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	GIPR	P48546	466 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	ENTPD1	P49961	510 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	LIM2	P55344	173 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	BTN3A2	P78410	334 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	RAB40B	Q12829	278 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	BNIP3	Q12983	259 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	INAVA	Q3KP66	663 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	GPAT3	Q53EU6	434 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	ZNF311	Q5JNZ3	666 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	ARMC4	Q5T2S8	1044 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	MFSD4B	Q5TF39	518 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	KIAA0895L	Q68EN5	471 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	ARMC6	Q6NXE6	501 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	DUS1L	Q6P1R4	473 aa	Known RBP	11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	PGBD2	Q6P3X8	592 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	RASSF6	Q6ZTQ3	369 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	RNF44	Q7L0R7	432 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	CCDC116	Q8IYX3	515 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	SLC7A13	Q8TCU3	470 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	ACOT11	Q8WXI4	607 aa	Predicted RBP	11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	OR2A14	Q96R47	310 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	OR7D2	Q96RA2	312 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	NXF2	Q9GZY0	626 aa	Known RBP	11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	SAP130	Q9H0E3	1048 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	KLHL31	Q9H511	634 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	XKR8	Q9H6D3	395 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	GPR27	Q9NS67	375 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	FAIM	Q9NVQ4	179 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	KCMF1	Q9P0J7	381 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	CRNN	Q9UBG3	495 aa	Predicted RBP	11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	MRPS33	Q9Y291	106 aa	Known RBP	11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	PEX16	Q9Y5Y5	336 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	GON4L	Q3T8J9	2241 aa		11.06	□□□□□ -0.64
LETMD1-223	ENST00000550442	PGRMC2	O15173	223 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	GPR75	O95800	540 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	FADS2	O95864	444 aa	Known RBP	11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	RECK	O95980	971 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	SCG5	P05408	212 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	CCNYL3	P0C7X3	344 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	GAL	P22466	123 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	FPR3	P25089	353 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	EPHA2	P29317	976 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	S100A5	P33763	92 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	GALNS	P34059	522 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	STT3A	P46977	705 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	PCYT1A	P49585	367 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	RGS6	P49758	472 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	PSMD4	P55036	377 aa	Known RBP	11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	UBE2I	P63279	158 aa	Known RBP	11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	CDK5	Q00535	292 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	LASP1	Q14847	261 aa	Known RBP	11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	LAPTM4A	Q15012	233 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	SYPL1	Q16563	259 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	ZNF404	Q494X3	552 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	C3orf38	Q5JPI3	329 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	GARNL3	Q5VVW2	1013 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	ANKRD34A	Q69YU3	496 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	MFSD12	Q6NUT3	480 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	SLC27A4	Q6P1M0	643 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	KIAA1324	Q6UXG2	1013 aa	Known RBP	11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	CCDC81	Q6ZN84	652 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	MED25	Q71SY5	747 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	VN1R4	Q7Z5H5	301 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	DRAXIN	Q8NBI3	349 aa	Predicted RBP	11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	B3GNT7	Q8NFL0	401 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	OR6Q1	Q8NGQ2	317 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	FLVCR1-AS1	Q8TAF5	88 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	PIGX	Q8TBF5	258 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	RAB8B	Q92930	207 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	C10orf90	Q96M02	699 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	HS6ST2	Q96MM7	605 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	LRFN5	Q96NI6	719 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	CCNL2	Q96S94	520 aa	Predicted RBP	11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	CSF3R	Q99062	836 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	PELO	Q9BRX2	385 aa	Known RBP	11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	ENAM	Q9NRM1	1142 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	SPHK1	Q9NYA1	384 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	CPNE7	Q9UBL6	633 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	EPHA6	Q9UF33	1036 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	APOBEC3B	Q9UH17	382 aa	Known RBP	11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	FBXW2	Q9UKT8	454 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	DIMT1	Q9UNQ2	313 aa	Known RBP	11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	TMEM5	Q9Y2B1	443 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	KALRN	O60229	2985 aa		11.05	□□□□□ -0.64
LETMD1-223	ENST00000550442	ADAMTS9	Q9P2N4	1935 aa		11.04	□□□□□ -0.64
LETMD1-223	ENST00000550442		A0A075B6Q4	140 aa		11.04	□□□□□ -0.64
LETMD1-223	ENST00000550442		A0A0J9YVX5	310 aa		11.04	□□□□□ -0.64
LETMD1-223	ENST00000550442	TRBV4-1	A0A0J9YWV2	114 aa		11.04	□□□□□ -0.64
LETMD1-223	ENST00000550442	SPTY2D1-AS1	A0A0U1RR47	76 aa		11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms