RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 GFM2Q969S9 779 aaKnown RBP12.29□□□□□ -0.44
NUP188-211ENST00000550219 ZNF681Q96N22 645 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 LRRC37BQ96QE4 947 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 PRPF18Q99633 342 aaKnown RBP12.29□□□□□ -0.44
NUP188-211ENST00000550219 SLC52A3Q9NQ40 469 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 CNIH4Q9P003 139 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 CNOT11Q9UKZ1 510 aaKnown RBP12.29□□□□□ -0.44
NUP188-211ENST00000550219 PSME2Q9UL46 239 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 CHCHD2Q9Y6H1 151 aaPredicted RBP12.29□□□□□ -0.44
NUP188-211ENST00000550219 EML6Q6ZMW3 1958 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 HCFC1P51610 2035 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 C2orf92A0A1B0GVN3 265 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 OR6C76A6NM76 312 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 CAPN14A8MX76 684 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 SCN2BO60939 215 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 HOXD4P09016 255 aaPredicted RBP12.28□□□□□ -0.44
NUP188-211ENST00000550219 CT62P0C5K7 136 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 LAMP1P11279 417 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 CD1EP15812 388 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 DDX5P17844 614 aaKnown RBP12.28□□□□□ -0.44
NUP188-211ENST00000550219 NT5EP21589 574 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 FRKP42685 505 aaPredicted RBP12.28□□□□□ -0.44
NUP188-211ENST00000550219 MASP1P48740 699 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 ALDH9A1P49189 494 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 POLR2JP52435 117 aaKnown RBP12.28□□□□□ -0.44
NUP188-211ENST00000550219 WNT3P56703 355 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 PHC1P78364 1004 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 RCAN2Q14206 197 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 TOMM20Q15388 145 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 NNATQ16517 81 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 NTRK2Q16620 822 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 AGKQ53H12 422 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 SPANXN4Q5MJ08 99 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 CPTPQ5TA50 214 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 BICRALQ6AI39 1079 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 DND1Q8IYX4 353 aaKnown RBP12.28□□□□□ -0.44
NUP188-211ENST00000550219 SAMD14Q8IZD0 417 aaPredicted RBP12.28□□□□□ -0.44
NUP188-211ENST00000550219 LRRC25Q8N386 305 aaPredicted RBP12.28□□□□□ -0.44
NUP188-211ENST00000550219 NATD1Q8N6N6 113 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 OR7A2PQ8NGA2 310 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 OR4K14Q8NGD5 310 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 NEIL3Q8TAT5 605 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 NRGNQ92686 78 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 PPCDCQ96CD2 204 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 ZBTB18Q99592 522 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 BHLHE41Q9C0J9 482 aaPredicted RBP12.28□□□□□ -0.44
NUP188-211ENST00000550219 PROK2Q9HC23 129 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 MIEF1Q9NQG6 463 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 SLC35C2Q9NQQ7 365 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 ARMCX1Q9P291 453 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 KCNN3Q9UGI6 736 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 UTS2RQ9UKP6 389 aa12.28□□□□□ -0.44
NUP188-211ENST00000550219 PHF3Q92576 2039 aaKnown RBP12.27□□□□□ -0.44
NUP188-211ENST00000550219 MYO1GB0I1T2 1018 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 TP53I11O14683 189 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 TRAPPC6AO75865 159 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 IL6P05231 212 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 PGRP06401 933 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 SLC35E2P0CK97 266 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 GABRA1P14867 456 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 RIPPLY3P57055 190 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 RIPPLY2Q5TAB7 128 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 ANKRD26P1Q6NSI1 321 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 MSANTD1Q6ZTZ1 278 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 TREML1Q86YW5 311 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 ZZZ3Q8IYH5 903 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 ULK2Q8IYT8 1036 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 FITM2Q8N6M3 262 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 CNRIP1Q96F85 164 aaPredicted RBP12.27□□□□□ -0.45
NUP188-211ENST00000550219 CXorf21Q9HAI6 301 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 ATAD3AQ9NVI7 634 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 CCDC167Q9P0B6 97 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 SH3BP4Q9P0V3 963 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 CAPN7Q9Y6W3 813 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 ZNF407Q9C0G0 2248 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 NCKAP5O14513 1909 aa12.27□□□□□ -0.45
NUP188-211ENST00000550219 C9JVG2 144 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 FAM47E-STBD1D6RA91 191 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 UQCRC1P31930 480 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 S100A3P33764 101 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 GALNSP34059 522 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 TMED10P49755 219 aaKnown RBP12.26□□□□□ -0.45
NUP188-211ENST00000550219 XKP51811 444 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 DGKQP52824 942 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 ART1P52961 327 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 NRG3P56975 720 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 DUSP8Q13202 625 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 MLC1Q15049 377 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 TESK1Q15569 626 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 PGS1Q32NB8 556 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 SLC25A35Q3KQZ1 300 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 FAM174BQ3ZCQ3 159 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 TBCELQ5QJ74 424 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 ZNF441Q8N8Z8 693 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 SPPL2AQ8TCT8 520 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 EXOSC8Q96B26 276 aaKnown RBP12.26□□□□□ -0.45
NUP188-211ENST00000550219 KLHL29Q96CT2 875 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 DUSP26Q9BV47 211 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 OR10A5Q9H207 317 aa12.26□□□□□ -0.45
NUP188-211ENST00000550219 ACSS1Q9NUB1 689 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms