RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-222ENST00000550155 NPIPA2E9PIF3 369 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 ARPC1BO15143 372 aaKnown RBP2.8□□□□□ -1.96
CNOT2-222ENST00000550155 TBL1XO60907 577 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 KERAO60938 352 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 ATP6V1G1O75348 118 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 SEC22BO75396 215 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 MAT2AP31153 395 aaKnown RBP2.8□□□□□ -1.96
CNOT2-222ENST00000550155 SMSP52788 366 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 NOP14P78316 857 aaKnown RBP2.8□□□□□ -1.96
CNOT2-222ENST00000550155 ELAVL3Q14576 367 aaKnown RBP2.8□□□□□ -1.96
CNOT2-222ENST00000550155 PKN2Q16513 984 aaKnown RBP2.8□□□□□ -1.96
CNOT2-222ENST00000550155 CLPPQ16740 277 aaPredicted RBP2.8□□□□□ -1.96
CNOT2-222ENST00000550155 HSP90AA5PQ58FG0 334 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 EOGTQ5NDL2 527 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 PRAMEF8Q5VWM4 474 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 NKAIN2Q5VXU1 208 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 ETFRF1Q6IPR1 90 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 RAB12Q6IQ22 244 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 KCTD9Q7L273 389 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 OR4F17Q8NGA8 305 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 DLX4Q92988 240 aaPredicted RBP2.8□□□□□ -1.96
CNOT2-222ENST00000550155 PTP4A1Q93096 173 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 SNX21Q969T3 373 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 CABS1Q96KC9 395 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 GPR137Q96N19 417 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 OR4F4Q96R69 305 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 ATP6V0BQ99437 205 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 TM2D1Q9BX74 207 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 C1orf21Q9H246 121 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 PATZ1Q9HBE1 687 aaKnown RBP2.8□□□□□ -1.96
CNOT2-222ENST00000550155 TRPC4Q9UBN4 977 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 MAD2L2Q9UI95 211 aa2.8□□□□□ -1.96
CNOT2-222ENST00000550155 RPH3AQ9Y2J0 694 aaPredicted RBP2.8□□□□□ -1.96
CNOT2-222ENST00000550155 USP6P35125 1406 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 ASTN1O14525 1302 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 A0A1B0GUA9 196 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 LRIT2A6NDA9 550 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.79□□□□□ -1.96
CNOT2-222ENST00000550155 SLC28A1O00337 649 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 LYPLA1O75608 230 aaPredicted RBP2.79□□□□□ -1.96
CNOT2-222ENST00000550155 BBOX1O75936 387 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 IGSF6O95976 241 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 TPM2P07951 284 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 GAP43P17677 238 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 CCNE1P24864 410 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 PTBP1P26599 531 aaKnown RBP eCLIP2.79□□□□□ -1.96
CNOT2-222ENST00000550155 HOXD10P28358 340 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 HPDP32754 393 aaPredicted RBP2.79□□□□□ -1.96
CNOT2-222ENST00000550155 RBMXP38159 391 aaKnown RBP2.79□□□□□ -1.96
CNOT2-222ENST00000550155 CASP3P42574 277 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 NSFP46459 744 aaKnown RBP2.79□□□□□ -1.96
CNOT2-222ENST00000550155 PPOXP50336 477 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 IL9RQ01113 521 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 RPA4Q13156 261 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 CBX3Q13185 183 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 LASP1Q14847 261 aaKnown RBP2.79□□□□□ -1.96
CNOT2-222ENST00000550155 KCTD19Q17RG1 926 aaPredicted RBP2.79□□□□□ -1.96
CNOT2-222ENST00000550155 EPC2Q52LR7 807 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 OR2B11Q5JQS5 317 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 FRA10AC1Q70Z53 315 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 PRSS42Q7Z5A4 293 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 SLC22A16Q86VW1 577 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 ZNF100Q8IYN0 542 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 HDDC3Q8N4P3 179 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 MLKLQ8NB16 471 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 C11orf24Q96F05 449 aaPredicted RBP2.79□□□□□ -1.96
CNOT2-222ENST00000550155 C16orf45Q96MC5 204 aaPredicted RBP2.79□□□□□ -1.96
CNOT2-222ENST00000550155 SMIM14Q96QK8 99 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 IL4I1Q96RQ9 567 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 CCSER1Q9C0I3 900 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 ABCG4Q9H172 646 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 THAP9Q9H5L6 903 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 COMMD8Q9NX08 183 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 IL19Q9UHD0 177 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 PURGQ9UJV8 347 aaKnown RBP2.79□□□□□ -1.96
CNOT2-222ENST00000550155 ZNF175Q9Y473 711 aa2.79□□□□□ -1.96
CNOT2-222ENST00000550155 RAI1Q7Z5J4 1906 aaPredicted RBP2.79□□□□□ -1.96
CNOT2-222ENST00000550155 LRRK1Q38SD2 2015 aa2.78□□□□□ -1.96
CNOT2-222ENST00000550155 SYNJ2BP-COX16A0A087WUM0 186 aa2.78□□□□□ -1.96
CNOT2-222ENST00000550155 A4D1N5 150 aa2.78□□□□□ -1.96
CNOT2-222ENST00000550155 ABCD4O14678 606 aa2.78□□□□□ -1.96
CNOT2-222ENST00000550155 ANP32DO95626 131 aa2.78□□□□□ -1.96
CNOT2-222ENST00000550155 TOP1P11387 765 aaKnown RBP2.78□□□□□ -1.96
CNOT2-222ENST00000550155 ARF4P18085 180 aaPredicted RBP2.78□□□□□ -1.96
CNOT2-222ENST00000550155 PRPHP41219 470 aa2.78□□□□□ -1.96
CNOT2-222ENST00000550155 LINC00315P59091 139 aa2.78□□□□□ -1.96
CNOT2-222ENST00000550155 RCN2Q14257 317 aa2.78□□□□□ -1.96
CNOT2-222ENST00000550155 SHHQ15465 462 aa2.78□□□□□ -1.96
CNOT2-222ENST00000550155 DNAJC21Q5F1R6 531 aaKnown RBP2.78□□□□□ -1.96
CNOT2-222ENST00000550155 B3GLCTQ6Y288 498 aa2.78□□□□□ -1.96
CNOT2-222ENST00000550155 MIER3Q7Z3K6 550 aa2.78□□□□□ -1.96
CNOT2-222ENST00000550155 CSNK1A1LQ8N752 337 aa2.78□□□□□ -1.96
CNOT2-222ENST00000550155 ZNF433Q8N7K0 673 aaPredicted RBP2.78□□□□□ -1.96
CNOT2-222ENST00000550155 DCAF4L2Q8NA75 395 aa2.78□□□□□ -1.96
CNOT2-222ENST00000550155 FIBINQ8TAL6 211 aa2.78□□□□□ -1.96
CNOT2-222ENST00000550155 TMEM37Q8WXS4 190 aa2.78□□□□□ -1.96
CNOT2-222ENST00000550155 KRT35Q92764 455 aa2.78□□□□□ -1.96
CNOT2-222ENST00000550155 CNIH4Q9P003 139 aa2.78□□□□□ -1.96
CNOT2-222ENST00000550155 XPO7Q9UIA9 1087 aaKnown RBP2.78□□□□□ -1.96
CNOT2-222ENST00000550155 STX8Q9UNK0 236 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms