RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 TRIM42Q8IWZ5 723 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 RIMKLAQ8IXN7 391 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 LRRC34Q8IZ02 419 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 RPRMLQ8N4K4 120 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 RND1Q92730 232 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 SDCCAG3Q96C92 435 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 RMND5BQ96G75 393 aaPredicted RBP15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 NUF2Q9BZD4 464 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 NEUROD4Q9HD90 331 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 SIRT3Q9NTG7 399 aaPredicted RBP15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 ZCCHC3Q9NUD5 404 aaKnown RBP15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 FAM120CQ9NX05 1096 aaKnown RBP15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 PCDHGB3Q9Y5G1 929 aa15.72■□□□□ 0.11
CHMP1A-208ENST00000550102 PKDREJQ9NTG1 2253 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 SCO2O43819 266 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 CBR3O75828 277 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 IL33O95760 270 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 HOXD4P09016 255 aaPredicted RBP15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 GABRA1P14867 456 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 GABRA3P34903 492 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 PTGER4P35408 488 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 RFX3P48380 749 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 CLDN8P56748 225 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 CRYZQ08257 329 aaKnown RBP15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 GAB1Q13480 694 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 LSM12Q3MHD2 195 aaKnown RBP15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 C1orf185Q5T7R7 199 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 AGBL2Q5U5Z8 902 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 ATG16L1Q676U5 607 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 CAMKMTQ7Z624 323 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 PLCZ1Q86YW0 608 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 WDSUB1Q8N9V3 476 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 FAM83FQ8NEG4 500 aaPredicted RBP15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 FBXO30Q8TB52 745 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 GPR151Q8TDV0 419 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 CA5BP1Q8WTZ4 195 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 ASB5Q8WWX0 329 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 OR5P2Q8WZ92 322 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 SLC9A6Q92581 669 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 COQ8BQ96D53 544 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 FAM120BQ96EK7 910 aaKnown RBP15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 BHLHE41Q9C0J9 482 aaPredicted RBP15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 MEAF6Q9HAF1 191 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 CHST11Q9NPF2 352 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 PNPOQ9NVS9 261 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 THAP1Q9NVV9 213 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 FAM215AQ9Y5M1 114 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 SNX8Q9Y5X2 465 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 HCFC1P51610 2035 aa15.71■□□□□ 0.11
CHMP1A-208ENST00000550102 ABCA12Q86UK0 2595 aa15.71■□□□□ 0.1
CHMP1A-208ENST00000550102 ADGRG4Q8IZF6 3080 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 GXYLT2A0PJZ3 443 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 SNNO75324 88 aaPredicted RBP15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 NKX2-2O95096 273 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 ACP2P11117 423 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 LBPP18428 481 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 CHRNB4P30926 498 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 MAP3K8P41279 467 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 PRIM2P49643 509 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 DIO3P55073 304 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 NUP107P57740 925 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 PMPCAQ10713 525 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 ZNF630Q2M218 657 aaPredicted RBP15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 SPDYE7PQ495Y7 208 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 EIPR1Q53HC9 387 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 WIPI1Q5MNZ9 446 aaPredicted RBP15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 ZCCHC12Q6PEW1 402 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 PM20D2Q8IYS1 436 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 ULK2Q8IYT8 1036 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 OR56A1Q8NGH5 318 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 OR14L1PQ8NHC6 308 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 PSMA8Q8TAA3 256 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 SFXN5Q8TD22 340 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 PIK3R3Q92569 461 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 JADE3Q92613 823 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 GIMAP5Q96F15 307 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 DUSP26Q9BV47 211 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 OR2B2Q9GZK3 357 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 ARGLU1Q9NWB6 273 aaPredicted RBP15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 PPP4R1LQ9P1A2 415 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 DKKL1Q9UK85 242 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 SLC6A5Q9Y345 797 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 CACNA1DQ01668 2161 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 DOCK7Q96N67 2140 aa15.7■□□□□ 0.1
CHMP1A-208ENST00000550102 TRPC5OSA6NMA1 111 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 FAM47E-STBD1D6RA91 191 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 HDAC3O15379 428 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 UTS2O95399 124 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 C6orf47O95873 294 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 ALOX5P09917 674 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 GRNP28799 593 aaKnown RBP15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 CLK3P49761 638 aaKnown RBP15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 GAS1P54826 345 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 TP53BP2Q13625 1128 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 CDSNQ15517 529 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 DUSP5Q16690 384 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 PGS1Q32NB8 556 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 NHSL2Q5HYW2 709 aa15.69■□□□□ 0.1
CHMP1A-208ENST00000550102 RTL6Q6ICC9 239 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms