RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 CPA2P48052 419 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 NR1H2P55055 460 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 BTKQ06187 659 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 PCLAFQ15004 111 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 ERCC6LQ2NKX8 1250 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 PRICKLE4Q2TBC4 344 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 EIPR1Q53HC9 387 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 C6orf163Q5TEZ5 329 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 LIPMQ5VYY2 423 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 EMBQ6PCB8 327 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 TRIM46Q7Z4K8 759 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 ADGRE4PQ86SQ3 457 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 RIBC1Q8N443 379 aaPredicted RBP11.04□□□□□ -0.64
DDX54-206ENST00000549271 C16orf78Q8WTQ4 265 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 HGDQ93099 445 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 CTHRC1Q96CG8 243 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 CNRIP1Q96F85 164 aaPredicted RBP11.04□□□□□ -0.64
DDX54-206ENST00000549271 ZFP3Q96NJ6 502 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 WFIKKN1Q96NZ8 548 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 HS3ST6Q96QI5 342 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 C19orf24Q9BVV8 132 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 GATA5Q9BWX5 397 aaPredicted RBP11.04□□□□□ -0.64
DDX54-206ENST00000549271 PARD6BQ9BYG5 372 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 SHCBP1LQ9BZQ2 653 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 ROPN1BQ9BZX4 212 aaPredicted RBP11.04□□□□□ -0.64
DDX54-206ENST00000549271 NXF5Q9H1B4 397 aaKnown RBP11.04□□□□□ -0.64
DDX54-206ENST00000549271 ROPN1Q9HAT0 212 aaPredicted RBP11.04□□□□□ -0.64
DDX54-206ENST00000549271 YAE1D1Q9NRH1 226 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 MAT2BQ9NZL9 334 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 CAMK2AQ9UQM7 478 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 DLGAP4Q9Y2H0 992 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 SLC6A5Q9Y345 797 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 CCL27Q9Y4X3 112 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 CCDC151A5D8V7 595 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 GOLGA6L10A6NI86 522 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 A8MXE2 369 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 H3BQF6 201 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 SNPHO15079 494 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 TO15178 435 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 TRIM13O60858 407 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 TP53P04637 393 aaPredicted RBP11.03□□□□□ -0.64
DDX54-206ENST00000549271 CREB1P16220 341 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 CSNK2A2P19784 350 aaPredicted RBP11.03□□□□□ -0.64
DDX54-206ENST00000549271 TIA1P31483 386 aaKnown RBP eCLIP11.03□□□□□ -0.64
DDX54-206ENST00000549271 PTGDSP41222 190 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 ALDH9A1P49189 494 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 PCYT1AP49585 367 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 ACSM2AQ08AH3 577 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 RCAN2Q14206 197 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 PRSS53Q2L4Q9 553 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 SPIN4Q56A73 249 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 CFAP157Q5JU67 520 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 WIPI1Q5MNZ9 446 aaPredicted RBP11.03□□□□□ -0.64
DDX54-206ENST00000549271 DCST1Q5T197 706 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 ACSM2BQ68CK6 577 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 PLEKHM3Q6ZWE6 761 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 CCDC63Q8NA47 563 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 FAM83FQ8NEG4 500 aaPredicted RBP11.03□□□□□ -0.64
DDX54-206ENST00000549271 ADCY4Q8NFM4 1077 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 OR1J4Q8NGS1 313 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.03□□□□□ -0.64
DDX54-206ENST00000549271 KLHL29Q96CT2 875 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 APOPT1Q96IL0 206 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 LCORQ96JN0 433 aaPredicted RBP11.03□□□□□ -0.64
DDX54-206ENST00000549271 PIGQQ9BRB3 760 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 TMEM109Q9BVC6 243 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 FAIM2Q9BWQ8 316 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 OR2B2Q9GZK3 357 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 METTL7AQ9H8H3 244 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 SLC17A7Q9P2U7 560 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 UTS2RQ9UKP6 389 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 PSME2Q9UL46 239 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 EXO1Q9UQ84 846 aaKnown RBP11.03□□□□□ -0.64
DDX54-206ENST00000549271 DTX4Q9Y2E6 619 aa11.03□□□□□ -0.64
DDX54-206ENST00000549271 GNG14A0A1W2PPG7 69 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 GNB5O14775 395 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 TMCC2O75069 709 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 ICOSLGO75144 302 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 SPAG7O75391 227 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 CBR3O75828 277 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 RCBTB2O95199 551 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 CBX7O95931 251 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 ANXA4P09525 319 aaPredicted RBP11.02□□□□□ -0.65
DDX54-206ENST00000549271 UROSP10746 265 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 CYP4B1P13584 511 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 PCSK2P16519 638 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 DRD5P21918 477 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 ALDH3A1P30838 453 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 GCKP35557 465 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 PPICP45877 212 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 ATP5J2P56134 94 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 EEF1A1P68104 462 aaKnown RBP11.02□□□□□ -0.65
DDX54-206ENST00000549271 RUNX1T1Q06455 604 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 EXOSC7Q15024 291 aaKnown RBP11.02□□□□□ -0.65
DDX54-206ENST00000549271 TOMM20Q15388 145 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 LTB4RQ15722 352 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 TRMT12Q53H54 448 aaKnown RBP11.02□□□□□ -0.65
DDX54-206ENST00000549271 EEF1A1P5Q5VTE0 462 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 CLEC6AQ6EIG7 209 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 ANGPTL8Q6UXH0 198 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms