RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 FLRT3Q9NZU0 649 aa15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 GRID1Q9ULK0 1009 aa15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 C19orf53Q9UNZ5 99 aaPredicted RBP15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 RPH3AQ9Y2J0 694 aaPredicted RBP15.75■□□□□ 0.11
CHMP1A-205ENST00000548650 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 UPK1AO00322 258 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 TNFSF13O75888 250 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 GOSR1O95249 250 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 TGM6O95932 706 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 CD99P14209 185 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 DNASE1P24855 282 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 NTSP30990 170 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 NAA20P61599 178 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 IMPG1Q17R60 797 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 SH2D4BQ5SQS7 431 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 IKBIPQ70UQ0 350 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 GRAMD2AQ8IUY3 354 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 OR2M3Q8NG83 312 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 OR4K17Q8NGC6 315 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 FAM76AQ8TAV0 307 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 MBD6Q96DN6 1003 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 AMDHD1Q96NU7 426 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 RTN4RQ9BZR6 473 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 GLIPR2Q9H4G4 154 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 DDX18Q9NVP1 670 aaKnown RBP15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 PPP4R1LQ9P1A2 415 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 PACSIN3Q9UKS6 424 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 ABCG2Q9UNQ0 655 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 CCL27Q9Y4X3 112 aa15.74■□□□□ 0.11
CHMP1A-205ENST00000548650 A0A1W2PNV4 684 aa15.73■□□□□ 0.11
CHMP1A-205ENST00000548650 H3BQF6 201 aa15.73■□□□□ 0.11
CHMP1A-205ENST00000548650 FADS1O60427 444 aa15.73■□□□□ 0.11
CHMP1A-205ENST00000548650 PLIN3O60664 434 aa15.73■□□□□ 0.11
CHMP1A-205ENST00000548650 ATE1O95260 518 aa15.73■□□□□ 0.11
CHMP1A-205ENST00000548650 SHBGP04278 402 aa15.73■□□□□ 0.11
CHMP1A-205ENST00000548650 CPA2P48052 419 aa15.73■□□□□ 0.11
CHMP1A-205ENST00000548650 DSCR4P56555 118 aaPredicted RBP15.73■□□□□ 0.11
CHMP1A-205ENST00000548650 DNAJB13P59910 316 aa15.73■□□□□ 0.11
CHMP1A-205ENST00000548650 CYP27C1Q4G0S4 372 aa15.73■□□□□ 0.11
CHMP1A-205ENST00000548650 NOXRED1Q6NXP6 359 aa15.73■□□□□ 0.11
CHMP1A-205ENST00000548650 LRRN4CLQ8ND94 238 aa15.73■□□□□ 0.11
CHMP1A-205ENST00000548650 LMF2Q9BU23 707 aaKnown RBP15.73■□□□□ 0.11
CHMP1A-205ENST00000548650 PIGMQ9H3S5 423 aa15.73■□□□□ 0.11
CHMP1A-205ENST00000548650 PLEKHF2Q9H8W4 249 aa15.73■□□□□ 0.11
CHMP1A-205ENST00000548650 FAM120CQ9NX05 1096 aaKnown RBP15.73■□□□□ 0.11
CHMP1A-205ENST00000548650 PTGDR2Q9Y5Y4 395 aa15.73■□□□□ 0.11
CHMP1A-205ENST00000548650 A0A1W2PPR1 153 aa15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 RAF1P04049 648 aa15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 HRGP04196 525 aa15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 IFI6P09912 130 aa15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 KLK2P20151 261 aa15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 PRPH2P23942 346 aa15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 STX5Q13190 355 aa15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 GAB1Q13480 694 aa15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 GANABQ14697 944 aaKnown RBP15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 BCL2A1Q16548 175 aa15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 CCDC153Q494R4 210 aa15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 FBXW10Q5XX13 1052 aa15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 CAMKMTQ7Z624 323 aa15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 TRIM44Q96DX7 344 aaPredicted RBP15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 ELP4Q96EB1 424 aa15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 C12orf65Q9H3J6 166 aaKnown RBP15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 DSN1Q9H410 356 aa15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 Q9N2J8 555 aa15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 RRAGDQ9NQL2 400 aaPredicted RBP15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 EDARQ9UNE0 448 aa15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 WBP11Q9Y2W2 641 aaKnown RBP15.72■□□□□ 0.11
CHMP1A-205ENST00000548650 SH3D21A4FU49 640 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 A8MXE2 369 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 NPIPB8E9PQR5 432 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 DIAPH2O60879 1101 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 CRCPO75575 148 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 IL33O95760 270 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 CPOXP36551 454 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 CLDN15P56746 228 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 PPP2R2AP63151 447 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 FOXD4Q12950 439 aaPredicted RBP15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 KIAA0040Q15053 153 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 DECR1Q16698 335 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 CFAP157Q5JU67 520 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 RAET1LQ5VY80 246 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 CLEC6AQ6EIG7 209 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 UBQLNLQ8IYU4 475 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 ZNF764Q96H86 408 aaPredicted RBP15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 EGLN2Q96KS0 407 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 DACH2Q96NX9 599 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 YIPF4Q9BSR8 244 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 OXSMQ9NWU1 459 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 MED11Q9P086 117 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 TESMINQ9Y4I5 508 aa15.71■□□□□ 0.11
CHMP1A-205ENST00000548650 SLC22A20A6NK97 555 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 H0YC42 278 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 CRHP06850 196 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 UROSP10746 265 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 PEPDP12955 493 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 HK1P19367 917 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 CRHR1P34998 444 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 DIO3P55073 304 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 TPD52P55327 224 aaPredicted RBP15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 EEF1A1P68104 462 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms