RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 LIMA1Q9UHB6 759 aaKnown RBP3.84□□□□□ -1.79
CBX5-203ENST00000547872 KCNS2Q9ULS6 477 aa3.84□□□□□ -1.79
CBX5-203ENST00000547872 ICAM5Q9UMF0 924 aa3.84□□□□□ -1.79
CBX5-203ENST00000547872 ZNF835Q9Y2P0 537 aa3.84□□□□□ -1.79
CBX5-203ENST00000547872 ZNF711Q9Y462 761 aa3.84□□□□□ -1.79
CBX5-203ENST00000547872 CACNA1CQ13936 2221 aa3.84□□□□□ -1.79
CBX5-203ENST00000547872 RTTNQ86VV8 2226 aa3.84□□□□□ -1.79
CBX5-203ENST00000547872 MTORP42345 2549 aa3.84□□□□□ -1.8
CBX5-203ENST00000547872 NIPBLQ6KC79 2804 aaeCLIP3.84□□□□□ -1.8
CBX5-203ENST00000547872 IGHV4OR15-8A0A075B7B6 117 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 FAM237AA0A1B0GTK4 181 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 FAM166BA8MTA8 275 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 TMCO5BA8MYB1 307 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 IDSB3KWA1 339 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 P4HA2O15460 535 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 ARHGEF9O43307 516 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 SPRY1O43609 319 aaPredicted RBP3.83□□□□□ -1.8
CBX5-203ENST00000547872 BUB3O43684 328 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 UGT1A9O60656 530 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 DNAJB6O75190 326 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 FTCDO95954 541 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 STATHP02808 62 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 CLEC3BP05452 202 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 HLA-DQB2P05538 268 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 HEXBP07686 556 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 HSP90AA1P07900 732 aaKnown RBP3.83□□□□□ -1.8
CBX5-203ENST00000547872 UGT1A6P19224 532 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 MSH3P20585 1137 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 MAGP20916 626 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 MTIF2P46199 727 aaKnown RBP3.83□□□□□ -1.8
CBX5-203ENST00000547872 NSFP46459 744 aaKnown RBP3.83□□□□□ -1.8
CBX5-203ENST00000547872 EFNA3P52797 238 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 CSE1LP55060 971 aaKnown RBP3.83□□□□□ -1.8
CBX5-203ENST00000547872 F2RL1P55085 397 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 CSNK2A1P68400 391 aaPredicted RBP3.83□□□□□ -1.8
CBX5-203ENST00000547872 MPP1Q00013 466 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 SYT16Q17RD7 645 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 CXorf66Q5JRM2 361 aaPredicted RBP3.83□□□□□ -1.8
CBX5-203ENST00000547872 SHEQ5VZ18 495 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 TXNRD3NBQ6F5E7 133 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 WBP2NLQ6ICG8 309 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 TTI2Q6NXR4 508 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 DCUN1D2Q6PH85 259 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 SPESP1Q6UW49 350 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 TMCO3Q6UWJ1 677 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 GBP6Q6ZN66 633 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 EXOC3L1Q86VI1 746 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 AMIGO1Q86WK6 493 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 CFAP206Q8IYR0 622 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 TRAM1L1Q8N609 369 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 RASGEF1AQ8N9B8 481 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 TTC29Q8NA56 475 aaPredicted RBP3.83□□□□□ -1.8
CBX5-203ENST00000547872 ACBD4Q8NC06 268 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 TMEM116Q8NCL8 245 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 CSNK2A3Q8NEV1 391 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 LILRB4Q8NHJ6 448 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 LINC01560Q8TB33 94 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 FAM57AQ8TBR7 257 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 PSMF1Q92530 271 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 FIG4Q92562 907 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 HAS2Q92819 552 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 ORAI1Q96D31 301 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 MMABQ96EY8 250 aaPredicted RBP3.83□□□□□ -1.8
CBX5-203ENST00000547872 RRNAD1Q96FB5 475 aaKnown RBP3.83□□□□□ -1.8
CBX5-203ENST00000547872 CCL19Q99731 98 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 TREX2Q9BQ50 279 aaPredicted RBP3.83□□□□□ -1.8
CBX5-203ENST00000547872 UTP23Q9BRU9 249 aaKnown RBP3.83□□□□□ -1.8
CBX5-203ENST00000547872 TRIM51Q9BSJ1 452 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 TUBGCP2Q9BSJ2 902 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 CNPY3Q9BT09 278 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 ZSCAN5AQ9BUG6 496 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 C1QTNF5Q9BXJ0 243 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 PLA2G12AQ9BZM1 189 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 POLR1EQ9GZS1 481 aaKnown RBP3.83□□□□□ -1.8
CBX5-203ENST00000547872 DEFB127Q9H1M4 99 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 KCNN2Q9H2S1 579 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 ZNF556Q9HAH1 456 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 UGT1A7Q9HAW7 530 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 UGT1A10Q9HAW8 530 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 UGT1A8Q9HAW9 530 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 KCNK13Q9HB14 408 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 MMP25Q9NPA2 562 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 PNPLA3Q9NST1 481 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 CUTCQ9NTM9 273 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 SPHK1Q9NYA1 384 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 ADAM22Q9P0K1 906 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 AMDHD2Q9Y303 409 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 PSAT1Q9Y617 370 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 KCNE2Q9Y6J6 123 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 AP1M2Q9Y6Q5 423 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 COLEC10Q9Y6Z7 277 aa3.83□□□□□ -1.8
CBX5-203ENST00000547872 CHD3Q12873 2000 aaKnown RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 IGHV1-45A0A0A0MS14 117 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 A0A0J9YY10 115 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 GTPBP10A4D1E9 387 aaKnown RBP3.82□□□□□ -1.8
CBX5-203ENST00000547872 IFITM10A6NMD0 228 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 GABRR3A8MPY1 467 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 G3V3Y1 287 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 CHUKO15111 745 aa3.82□□□□□ -1.8
CBX5-203ENST00000547872 VEGFDO43915 354 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms