RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 HIVEP2P31629 2446 aa11.31□□□□□ -0.6
COPS7A-221ENST00000546229 A0A087WV62 115 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 IGLV3-32A0A0A0MS00 114 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 SERTM1A2A2V5 107 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 OR2M5A3KFT3 312 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 TRIM64A6NGJ6 449 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 TRIM64BA6NI03 449 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 TRIM49D1C9J1S8 452 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 EMC8O43402 210 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 DLX3O60479 287 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 BCAS2O75934 225 aaPredicted RBP11.3□□□□□ -0.6
COPS7A-221ENST00000546229 NID1P14543 1247 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 PAX1P15863 534 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 TCEA1P23193 301 aaKnown RBP11.3□□□□□ -0.6
COPS7A-221ENST00000546229 TIA1P31483 386 aaKnown RBP eCLIP11.3□□□□□ -0.6
COPS7A-221ENST00000546229 PHBP35232 272 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 CAPRIN1Q14444 709 aaKnown RBP11.3□□□□□ -0.6
COPS7A-221ENST00000546229 ACKR1Q16570 336 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 SCIMPQ6UWF3 145 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 APOOLQ6UXV4 268 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 ZNF550Q7Z398 422 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 METTL25Q8N6Q8 603 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 FNDC9Q8TBE3 224 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 EXOSC8Q96B26 276 aaKnown RBP11.3□□□□□ -0.6
COPS7A-221ENST00000546229 PGM2Q96G03 612 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 ZNF845Q96IR2 970 aaPredicted RBP11.3□□□□□ -0.6
COPS7A-221ENST00000546229 ADGRG7Q96K78 797 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 Q96MF0 132 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 MDFIQ99750 246 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 DSN1Q9H410 356 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 DMGDHQ9UI17 866 aaKnown RBP11.3□□□□□ -0.6
COPS7A-221ENST00000546229 PSME2Q9UL46 239 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 ABCG2Q9UNQ0 655 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 ZNF337Q9Y3M9 751 aa11.3□□□□□ -0.6
COPS7A-221ENST00000546229 SCO2O43819 266 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 TNFRSF21O75509 655 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 AQP8O94778 261 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 INHBAP08476 426 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 PEPDP12955 493 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 IL12BP29460 328 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 MAP3K8P41279 467 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 SERPINB9P50453 376 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 OCRLQ01968 901 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 GANABQ14697 944 aaKnown RBP11.29□□□□□ -0.6
COPS7A-221ENST00000546229 RASA2Q15283 850 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 OR2A2Q6IF42 318 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 C8orf74Q6P047 294 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 SYT10Q6XYQ8 523 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 SLC44A2Q8IWA5 706 aaPredicted RBP11.29□□□□□ -0.6
COPS7A-221ENST00000546229 OR2L13Q8N349 312 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 OR5M1Q8NGP8 315 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 CAVIN3Q969G5 261 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 PIGTQ969N2 578 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 MTBPQ96DY7 904 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 C1GALT1C1Q96EU7 318 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 KCNA7Q96RP8 456 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 NPAS1Q99742 590 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 KLHDC3Q9BQ90 382 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 GSX2Q9BZM3 304 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 SHCBP1LQ9BZQ2 653 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 STMN4Q9H169 189 aaPredicted RBP11.29□□□□□ -0.6
COPS7A-221ENST00000546229 GSTO2Q9H4Y5 243 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 TAS2R7Q9NYW3 318 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 TMEM216Q9P0N5 145 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 NDRG3Q9UGV2 375 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 ADAM21Q9UKJ8 722 aa11.29□□□□□ -0.6
COPS7A-221ENST00000546229 C19orf53Q9UNZ5 99 aaPredicted RBP11.29□□□□□ -0.6
COPS7A-221ENST00000546229 EIF3LQ9Y262 564 aaKnown RBP11.29□□□□□ -0.6
COPS7A-221ENST00000546229 SONP18583 2426 aaKnown RBP11.28□□□□□ -0.6
COPS7A-221ENST00000546229 UPK1AO00322 258 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 UBFD1O14562 309 aaKnown RBP11.28□□□□□ -0.6
COPS7A-221ENST00000546229 KLF4O43474 513 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 SMPD2O60906 423 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 SMNDC1O75940 238 aaKnown RBP eCLIP11.28□□□□□ -0.6
COPS7A-221ENST00000546229 SOX30O94993 753 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 IGKV1D-16P01601 117 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 DDCP20711 480 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 PSMA4P25789 261 aaKnown RBP11.28□□□□□ -0.6
COPS7A-221ENST00000546229 SLC6A8P48029 635 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 FOXA1P55317 472 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 SIRPAP78324 504 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.28□□□□□ -0.6
COPS7A-221ENST00000546229 ERCC6LQ2NKX8 1250 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 CTU2Q2VPK5 515 aaKnown RBP11.28□□□□□ -0.6
COPS7A-221ENST00000546229 SPIN4Q56A73 249 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 FAM71E1Q6IPT2 247 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 TIFABQ6ZNK6 161 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 C20orf204Q6ZNR8 217 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 GPRIN3Q6ZVF9 776 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 YTHDF3Q7Z739 585 aaKnown RBP11.28□□□□□ -0.6
COPS7A-221ENST00000546229 UBQLNLQ8IYU4 475 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 SAMD14Q8IZD0 417 aaPredicted RBP11.28□□□□□ -0.6
COPS7A-221ENST00000546229 FAM9CQ8IZT9 166 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 CNEP1R1Q8N9A8 125 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 ZNF610Q8N9Z0 462 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 NOA1Q8NC60 698 aaKnown RBP11.28□□□□□ -0.6
COPS7A-221ENST00000546229 OR4K17Q8NGC6 315 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 MZB1Q8WU39 189 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 L3HYPDHQ96EM0 354 aa11.28□□□□□ -0.6
COPS7A-221ENST00000546229 PIK3IP1Q96FE7 263 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms