RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 EPHA4P54764 986 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 ELOAQ14241 798 aaKnown RBP12.71□□□□□ -0.37
HCFC2-202ENST00000544223 GRM7Q14831 915 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 DCST1Q5T197 706 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 ADAMTS16Q8TE57 1224 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 NRBF2Q96F24 287 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 DGAT2Q96PD7 388 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 DPYSL5Q9BPU6 564 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 NPLQ9BXD5 320 aaPredicted RBP12.71□□□□□ -0.37
HCFC2-202ENST00000544223 AKIRIN1Q9H9L7 192 aaPredicted RBP12.71□□□□□ -0.37
HCFC2-202ENST00000544223 FANCEQ9HB96 536 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 NLGN3Q9NZ94 848 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 FLRT3Q9NZU0 649 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 ERVK-18Q9QC07 812 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 CDC14AQ9UNH5 594 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 ZNF443Q9Y2A4 671 aaPredicted RBP12.71□□□□□ -0.37
HCFC2-202ENST00000544223 PIP5K1CO60331 668 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 KRT20P35900 424 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 NR1H2P55055 460 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 CLDN6P56747 220 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 TAS2R41P59536 307 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 OCA2Q04671 838 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 PTGES3Q15185 160 aaKnown RBP12.7□□□□□ -0.38
HCFC2-202ENST00000544223 ARHGAP11BQ3KRB8 267 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 KCTD21Q4G0X4 260 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 LANCL3Q6ZV70 420 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 PRR22Q8IZ63 422 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 C16orf52Q8NHV5 167 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 RELTQ969Z4 430 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 RDH12Q96NR8 316 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 IL4I1Q96RQ9 567 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 DGCR6LQ9BY27 220 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 OR8D2Q9GZM6 311 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 PIGUQ9H490 435 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 FOLH1BQ9HBA9 442 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 LANCL2Q9NS86 450 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 SLC9A8Q9Y2E8 581 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 TMEM221A6NGB7 291 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 C17orf105B2RV13 164 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 H3BN98 237 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 M0R296 226 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 KCNK2O95069 426 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 CHMP24386 653 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 PCSK6P29122 969 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 RXRGP48443 463 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 HMGA2P52926 109 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 RGS8P57771 180 aaPredicted RBP12.7□□□□□ -0.38
HCFC2-202ENST00000544223 ENTPD8Q5MY95 495 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 PDZK1Q5T2W1 519 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 MRPL2Q5T653 305 aaKnown RBP12.7□□□□□ -0.38
HCFC2-202ENST00000544223 PGBD2Q6P3X8 592 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 ZER1Q7Z7L7 766 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 SAMD14Q8IZD0 417 aaPredicted RBP12.7□□□□□ -0.38
HCFC2-202ENST00000544223 D2HGDHQ8N465 521 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 GATSQ8NAP1 163 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 OR4C6Q8NH72 309 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 EFHD2Q96C19 240 aaPredicted RBP12.7□□□□□ -0.38
HCFC2-202ENST00000544223 ZNF501Q96CX3 271 aaPredicted RBP12.7□□□□□ -0.38
HCFC2-202ENST00000544223 OR6C1Q96RD1 312 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 DSN1Q9H410 356 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 CSNK1G3Q9Y6M4 447 aa12.7□□□□□ -0.38
HCFC2-202ENST00000544223 SPENQ96T58 3664 aaKnown RBP12.7□□□□□ -0.38
HCFC2-202ENST00000544223 KPNA4O00629 521 aaPredicted RBP12.69□□□□□ -0.38
HCFC2-202ENST00000544223 CLDN4O14493 209 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 GNB5O14775 395 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 ASNA1O43681 348 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 UGT2B11O75310 529 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 CYP7B1O75881 506 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 MMP11P24347 488 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 ANXA11P50995 505 aaKnown RBP12.69□□□□□ -0.38
HCFC2-202ENST00000544223 MLLT10P55197 1068 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 MAD2L1BPQ15013 274 aaPredicted RBP12.69□□□□□ -0.38
HCFC2-202ENST00000544223 INAVAQ3KP66 663 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 TCTE1Q5JU00 501 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 GPR135Q8IZ08 494 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 CDRT4Q8N9R6 151 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 OR4K5Q8NGD3 323 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 TMEM255BQ8WV15 326 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 POP5Q969H6 163 aaKnown RBP12.69□□□□□ -0.38
HCFC2-202ENST00000544223 CNDP2Q96KP4 475 aaKnown RBP12.69□□□□□ -0.38
HCFC2-202ENST00000544223 PINK1Q9BXM7 581 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 ITPAQ9BY32 194 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 RBM38Q9H0Z9 239 aaKnown RBP12.69□□□□□ -0.38
HCFC2-202ENST00000544223 ZNF556Q9HAH1 456 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 SLC13A4Q9UKG4 626 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 TMCC3Q9ULS5 477 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 LIPT1Q9Y234 373 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 A0A087WUU8 490 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 A0A087WXM4 84 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 SH3PXD2BA1X283 911 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 FITM1A5D6W6 292 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 DUXAA6NLW8 204 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 ENO4A6NNW6 628 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 CCNYL3P0C7X3 344 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 RYKP34925 604 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 HLCSP50747 726 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 RFX4Q33E94 735 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 PRICKLE2Q7Z3G6 844 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 ZBTB46Q86UZ6 589 aa12.69□□□□□ -0.38
HCFC2-202ENST00000544223 OR6C4Q8NGE1 309 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms