RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 COPS7AQ9UBW8 275 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 C14orf166Q9Y224 244 aaKnown RBP18.32■□□□□ 0.52
SUDS3-204ENST00000543473 SLC22A5O76082 557 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 GSRP00390 522 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 PET100P0DJ07 73 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 IL32P24001 234 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 GRPRP30550 384 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 RGRP47804 291 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 VSX2P58304 361 aaPredicted RBP18.32■□□□□ 0.52
SUDS3-204ENST00000543473 RHEBQ15382 184 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 LRIT3Q3SXY7 679 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 MLIPQ5VWP3 458 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 MTFR2Q6P444 385 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 MFSD6LQ8IWD5 586 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 GTPBP8Q8N3Z3 284 aaPredicted RBP18.32■□□□□ 0.52
SUDS3-204ENST00000543473 RNF175Q8N4F7 328 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 NEURL2Q9BR09 285 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 MFFQ9GZY8 342 aa18.32■□□□□ 0.52
SUDS3-204ENST00000543473 GOSR2O14653 212 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 ADAMTS4O75173 837 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 HLA-EP13747 358 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 ATP5A1P25705 553 aaKnown RBP18.31■□□□□ 0.52
SUDS3-204ENST00000543473 UBXN2BQ14CS0 331 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 KDM4DQ6B0I6 523 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 ENPP7Q6UWV6 458 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 PMM1Q92871 262 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 SLC41A3Q96GZ6 507 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 POLMQ9NP87 494 aaPredicted RBP18.31■□□□□ 0.52
SUDS3-204ENST00000543473 MYH9P35579 1960 aaKnown RBP18.31■□□□□ 0.52
SUDS3-204ENST00000543473 FABP7O15540 132 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 MAS1P04201 325 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 BMP1P13497 986 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 ARSBP15848 533 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 GABRA3P34903 492 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 AAK1Q2M2I8 961 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 TMEM205Q6UW68 189 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 CLDN22Q8N7P3 220 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 FARS2O95363 451 aaKnown RBP18.31■□□□□ 0.52
SUDS3-204ENST00000543473 ITGBL1O95965 494 aaPredicted RBP18.31■□□□□ 0.52
SUDS3-204ENST00000543473 ARNTP27540 789 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 CST5P28325 142 aaPredicted RBP18.31■□□□□ 0.52
SUDS3-204ENST00000543473 SLC5A12Q1EHB4 618 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 DLEU7Q6UYE1 221 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 GPR26Q8NDV2 337 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 OR4K13Q8NH42 304 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 SRA1Q9HD15 236 aaKnown RBP18.31■□□□□ 0.52
SUDS3-204ENST00000543473 PRSS21Q9Y6M0 314 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 TMEM150CB9EJG8 249 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 F8W036 122 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 S1PR1P21453 382 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 MLLT3P42568 568 aaPredicted RBP18.31■□□□□ 0.52
SUDS3-204ENST00000543473 HBA1P69905 142 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 BLOC1S1P78537 153 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 CDNFQ49AH0 187 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 TMEM207Q6UWW9 146 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 OR5T3Q8NGG3 340 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 SORCS1Q8WY21 1168 aa18.31■□□□□ 0.52
SUDS3-204ENST00000543473 C7orf50Q9BRJ6 194 aaKnown RBP18.31■□□□□ 0.52
SUDS3-204ENST00000543473 DDX31Q9H8H2 851 aaKnown RBP18.31■□□□□ 0.52
SUDS3-204ENST00000543473 TEX51A0A1B0GUA7 166 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 MUSKO15146 869 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 GDPD3Q7L5L3 318 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 CYB561A3Q8NBI2 242 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 EDDM13A0A1B0GTR0 161 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 ZNF860A6NHJ4 632 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 NPIPB15A6NHN6 443 aaPredicted RBP18.3■□□□□ 0.52
SUDS3-204ENST00000543473 EEF1E1-BLOC1S5C9J1V9 151 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 F5H5P2 479 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 KCNK5O95279 499 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 GASTP01350 101 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 PDGFAP04085 211 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 ERVK-25P63136 954 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 MGAT3Q09327 533 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 OR2L8Q8NGY9 312 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 PCNPQ8WW12 178 aaKnown RBP18.3■□□□□ 0.52
SUDS3-204ENST00000543473 TXNL4BQ9NX01 149 aaKnown RBP18.3■□□□□ 0.52
SUDS3-204ENST00000543473 QPCTLQ9NXS2 382 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 FRS3O43559 492 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 HSD11B1P28845 292 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 SEMA3BQ13214 749 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 ACSM3Q53FZ2 586 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 FAM69AQ5T7M9 428 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 OR4C11Q6IEV9 310 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 PODNL1Q6PEZ8 512 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 NLGN4XQ8N0W4 816 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 OR51L1Q8NGJ5 315 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 DYNC2LI1Q8TCX1 351 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 HMGB4Q8WW32 186 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 NEIL2Q969S2 332 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 ZNF419Q96HQ0 510 aaPredicted RBP18.3■□□□□ 0.52
SUDS3-204ENST00000543473 RGCCQ9H4X1 137 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 GLTPQ9NZD2 209 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 KLHL21Q9UJP4 597 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 ACSL5Q9ULC5 683 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 TMEM14AQ9Y6G1 99 aa18.3■□□□□ 0.52
SUDS3-204ENST00000543473 MARF1Q9Y4F3 1742 aaKnown RBP18.3■□□□□ 0.52
SUDS3-204ENST00000543473 EIF1AYO14602 144 aaKnown RBP18.29■□□□□ 0.52
SUDS3-204ENST00000543473 CCR7P32248 378 aa18.29■□□□□ 0.52
SUDS3-204ENST00000543473 RBMXP38159 391 aaKnown RBP18.29■□□□□ 0.52
SUDS3-204ENST00000543473 EIF1AXP47813 144 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms