RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 STX11O75558 287 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 PPM1BO75688 479 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 GUSBP08236 651 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 SOX3P41225 446 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 RFX3P48380 749 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 CYB561P49447 251 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 GZMMP51124 257 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 CRISP3P54108 245 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.29■■□□□ 1
HOMER3-205ENST00000542541 FIGNL1Q6PIW4 674 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 YTHDF3Q7Z739 585 aaKnown RBP21.29■■□□□ 1
HOMER3-205ENST00000542541 SLC30A8Q8IWU4 369 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 TNIP2Q8NFZ5 429 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 OR2T12Q8NG77 320 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 SPACA9Q96E40 222 aaPredicted RBP21.29■■□□□ 1
HOMER3-205ENST00000542541 SMAD5Q99717 465 aaKnown RBP21.29■■□□□ 1
HOMER3-205ENST00000542541 PIF1Q9H611 641 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 ZBTB20Q9HC78 741 aaPredicted RBP21.29■■□□□ 1
HOMER3-205ENST00000542541 HPF1Q9NWY4 346 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 MED13Q9UHV7 2174 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 OR6C70A6NIJ9 312 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 FAM220BPB1ANY3 271 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 HS6ST1O60243 411 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 ZNF354AO60765 605 aaPredicted RBP21.29■■□□□ 1
HOMER3-205ENST00000542541 ARAFP10398 606 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 HLCSP50747 726 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 CDK6Q00534 326 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 EFR3AQ14156 821 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 ADRM1Q16186 407 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 SYPL1Q16563 259 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 LACTB2Q53H82 288 aaPredicted RBP21.29■■□□□ 1
HOMER3-205ENST00000542541 LYPD8Q6UX82 237 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 NUP54Q7Z3B4 507 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 IFNEQ86WN2 208 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 TM9SF4Q92544 642 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 PMM1Q92871 262 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 EXTL1Q92935 676 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 MAL2Q969L2 176 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 EFHD2Q96C19 240 aaPredicted RBP21.29■■□□□ 1
HOMER3-205ENST00000542541 SGCZQ96LD1 299 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 COL21A1Q96P44 957 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 ADOQ96SZ5 270 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 UTP23Q9BRU9 249 aaKnown RBP21.29■■□□□ 1
HOMER3-205ENST00000542541 RNF32Q9H0A6 362 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 PRORYQ9H606 182 aa21.29■■□□□ 1
HOMER3-205ENST00000542541 TP53I11O14683 189 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 TSPAN2O60636 221 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 OR6B1O95007 311 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 BCHEP06276 602 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 OC90Q02509 493 aaPredicted RBP21.28■■□□□ 1
HOMER3-205ENST00000542541 SCARB2Q14108 478 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 ZSCAN26Q16670 478 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 VMACQ2NL98 169 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 ZNF791Q3KP31 576 aaPredicted RBP21.28■■□□□ 1
HOMER3-205ENST00000542541 CCNJQ5T5M9 372 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 PRAMEF8Q5VWM4 474 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 PRAMEF7Q5VXH5 474 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 REEP3Q6NUK4 255 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 IL20RBQ6UXL0 311 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 LRRC74BQ6ZQY2 392 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 PTOV1Q86YD1 416 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 ZZZ3Q8IYH5 903 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 ANKFN1Q8N957 763 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 KCTD14Q9BQ13 255 aaPredicted RBP21.28■■□□□ 1
HOMER3-205ENST00000542541 WDR45Q9Y484 360 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 PCDHGB7Q9Y5F8 929 aa21.28■■□□□ 1
HOMER3-205ENST00000542541 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.28■■□□□ 1
HOMER3-205ENST00000542541 DSPP15924 2871 aaKnown RBP21.27■■□□□ 1
HOMER3-205ENST00000542541 ELOVL7A1L3X0 281 aa21.27■■□□□ 1
HOMER3-205ENST00000542541 PRAMEF27A3QJZ7 478 aa21.27■■□□□ 1
HOMER3-205ENST00000542541 DNAJC8O75937 253 aaPredicted RBP21.27■■□□□ 1
HOMER3-205ENST00000542541 H6PDO95479 791 aa21.27■■□□□ 1
HOMER3-205ENST00000542541 GSK3BP49841 420 aa21.27■■□□□ 1
HOMER3-205ENST00000542541 POLE2P56282 527 aa21.27■■□□□ 1
HOMER3-205ENST00000542541 RPP38P78345 283 aaKnown RBP21.27■■□□□ 1
HOMER3-205ENST00000542541 NTRK2Q16620 822 aa21.27■■□□□ 1
HOMER3-205ENST00000542541 AP1ARQ63HQ0 302 aa21.27■■□□□ 1
HOMER3-205ENST00000542541 TTC9Q92623 222 aa21.27■■□□□ 1
HOMER3-205ENST00000542541 HAS2Q92819 552 aa21.27■■□□□ 1
HOMER3-205ENST00000542541 TMCO6Q96DC7 493 aa21.27■■□□□ 1
HOMER3-205ENST00000542541 TMEM19Q96HH6 336 aa21.27■■□□□ 1
HOMER3-205ENST00000542541 ARHGAP9Q9BRR9 750 aa21.27■■□□□ 1
HOMER3-205ENST00000542541 ZNF350Q9GZX5 532 aa21.27■■□□□ 1
HOMER3-205ENST00000542541 HOXD1Q9GZZ0 328 aa21.27■■□□□ 1
HOMER3-205ENST00000542541 TRIM45Q9H8W5 580 aaPredicted RBP21.27■■□□□ 1
HOMER3-205ENST00000542541 ANGPT4Q9Y264 503 aa21.27■■□□□ 1
HOMER3-205ENST00000542541 DOCK10Q96BY6 2186 aa21.27■■□□□ 1
HOMER3-205ENST00000542541 A0A0G2JPF8 293 aa21.26■□□□□ 0.99
HOMER3-205ENST00000542541 HNRNPCL2B2RXH8 293 aa21.26■□□□□ 0.99
HOMER3-205ENST00000542541 HNRNPCL3B7ZW38 293 aa21.26■□□□□ 0.99
HOMER3-205ENST00000542541 WDPCPO95876 746 aa21.26■□□□□ 0.99
HOMER3-205ENST00000542541 IGKV1D-16P01601 117 aa21.26■□□□□ 0.99
HOMER3-205ENST00000542541 HNRNPCL4P0DMR1 293 aa21.26■□□□□ 0.99
HOMER3-205ENST00000542541 HSD17B1P14061 328 aa21.26■□□□□ 0.99
HOMER3-205ENST00000542541 NCALDP61601 193 aa21.26■□□□□ 0.99
HOMER3-205ENST00000542541 FUT5Q11128 374 aa21.26■□□□□ 0.99
HOMER3-205ENST00000542541 VEZF1Q14119 521 aa21.26■□□□□ 0.99
HOMER3-205ENST00000542541 INTS11Q5TA45 600 aaKnown RBP21.26■□□□□ 0.99
HOMER3-205ENST00000542541 IGFL2Q6UWQ7 119 aa21.26■□□□□ 0.99
HOMER3-205ENST00000542541 FAM13CQ8NE31 585 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms