RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SNTNA6NMZ2 147 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 WASHC1A8K0Z3 465 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 B4DXG7 233 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 C1QTNF3-AMACRE9PGA6 284 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC30A4O14863 429 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 PGRMC2O15173 223 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 PLA2G10O15496 165 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 IDH3BO43837 385 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 CYP7B1O75881 506 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 NFATC1O95644 943 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 IGHA1P01876 353 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 PCCBP05166 539 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 HMGN2P05204 90 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 FHP07954 510 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 TSPAN19P0C672 248 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC35G4P0C7Q5 338 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 FAM157BP0CG42 384 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 NR2F6P10588 404 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 F3P13726 295 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 MYL12AP19105 171 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 HIST1H1TP22492 207 aaPredicted RBP4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 TCEA1P23193 301 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 FPR3P25089 353 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 ATP5A1P25705 553 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 PKLRP30613 574 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 SDC2P34741 201 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 DRD3P35462 400 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 SOX18P35713 384 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 AHRP35869 848 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 TRIM23P36406 574 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 IFNGR2P38484 337 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 BCL6P41182 706 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 VIPR2P41587 438 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 STAT5AP42229 794 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 TSFMP43897 325 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 MTNR1AP48039 350 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 RAB28P51157 221 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 CLCNKAP51800 687 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 FABP5Q01469 135 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF155Q12901 538 aaPredicted RBP4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 RIN1Q13671 783 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 CAMK1Q14012 370 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC9A5Q14940 896 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 TRAM2Q15035 370 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 DECR1Q16698 335 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 TMEM44Q2T9K0 475 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 DDI2Q5TDH0 399 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 OR2G6Q5TZ20 316 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC48A1Q6P1K1 146 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC27A4Q6P1M0 643 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 ABHD17CQ6PCB6 329 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 METAP1DQ6UB28 335 aaPredicted RBP4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 FAM131AQ6UXB0 335 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 WASH2PQ6VEQ5 465 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 SFTPA1Q8IWL2 248 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 VWA5B2Q8N398 1253 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 RAB42Q8N4Z0 105 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 ACOT4Q8N9L9 421 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 TEX47Q8TBZ9 253 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 CAPSLQ8WWF8 208 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 AP3S1Q92572 193 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 UFD1Q92890 307 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 C16orf58Q96GQ5 468 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 ZC3HAV1LQ96H79 300 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 GUCD1Q96NT3 240 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 BBS4Q96RK4 519 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 COQ7Q99807 217 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 C17orf62Q9BQA9 187 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 COL25A1Q9BXS0 654 aaPredicted RBP4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 C11orf54Q9H0W9 315 aaPredicted RBP4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 EGLN3Q9H6Z9 239 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 PPP1R3EQ9H7J1 279 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC6A20Q9NP91 592 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 IL23AQ9NPF7 189 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 TIGARQ9NQ88 270 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 SEMA4GQ9NTN9 838 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 MED17Q9NVC6 651 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 IL20Q9NYY1 176 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 NTMQ9P121 344 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 SNX7Q9UNH6 387 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 YARS2Q9Y2Z4 477 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 MRPS23Q9Y3D9 190 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 ATG4BQ9Y4P1 393 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 KCNE3Q9Y6H6 103 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 NINQ8N4C6 2090 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 PRRC2BQ5JSZ5 2229 aaKnown RBP4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 TMEM265A0A087WTH1 108 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 A0A0B4J293 547 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 A0A0G2JN53 185 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 FAM221AA4D161 298 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 FABP12A6NFH5 140 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 TTC36A6NLP5 189 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 FAM170BA6NMN3 283 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 TTLL8A6PVC2 850 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 J3QRE1 110 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 SURF4O15260 269 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 EMC8O43402 210 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 SCO2O43819 266 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms