RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 SOD1P00441 154 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 ADAP00813 363 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 RAF1P04049 648 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 ACSL1P33121 698 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 MAPK8P45983 427 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 INPP1P49441 399 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 WNT4P56705 351 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 POLR2LP62875 67 aaKnown RBP8.58□□□□□ -1.04
THBS3-211ENST00000541990 PPP3R1P63098 170 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 SUZ12Q15022 739 aaKnown RBP8.58□□□□□ -1.04
THBS3-211ENST00000541990 CST6Q15828 149 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 PLEKHM3Q6ZWE6 761 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 RD3Q7Z3Z2 195 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 KIF18BQ86Y91 864 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 MARCH9Q86YJ5 346 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 OR4N4Q8N0Y3 316 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 GHDCQ8N2G8 530 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 VPS37AQ8NEZ2 397 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 BEST4Q8NFU0 473 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 OR8J1Q8NGP2 316 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 OTUB1Q96FW1 271 aaPredicted RBP8.58□□□□□ -1.04
THBS3-211ENST00000541990 TRAF4Q9BUZ4 470 aaPredicted RBP8.58□□□□□ -1.04
THBS3-211ENST00000541990 FOXQ1Q9C009 403 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 KCMF1Q9P0J7 381 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 DIMT1Q9UNQ2 313 aaKnown RBP8.58□□□□□ -1.04
THBS3-211ENST00000541990 NCKAP1Q9Y2A7 1128 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 CACNA1IQ9P0X4 2223 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 CABIN1Q9Y6J0 2220 aa8.58□□□□□ -1.04
THBS3-211ENST00000541990 TBC1D3DA0A087WVF3 549 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 TBC1D3IA0A087WXS9 549 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 TBC1D3EA0A087X179 549 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 TBC1D3KA0A087X1G2 549 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 TBC1D3FA6NER0 549 aaPredicted RBP8.57□□□□□ -1.04
THBS3-211ENST00000541990 TBC1D3LB9A6J9 549 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 STK25O00506 426 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 MBTPS2O43462 519 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 TOXO94900 526 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 TBC1D3HP0C7X1 549 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 HSD3B1P14060 373 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 HOXB2P14652 356 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 TIA1P31483 386 aaKnown RBP eCLIP8.57□□□□□ -1.043e-6■■■■□ 21.3
THBS3-211ENST00000541990 NSG1P42857 185 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 GPR1P46091 355 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 PPP2CBP62714 309 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 PPP2CAP67775 309 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 MEF2AQ02078 507 aaPredicted RBP8.57□□□□□ -1.04
THBS3-211ENST00000541990 CRYZQ08257 329 aaKnown RBP8.57□□□□□ -1.04
THBS3-211ENST00000541990 ZMYND11Q15326 602 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 SF3A2Q15428 464 aaKnown RBP8.57□□□□□ -1.04
THBS3-211ENST00000541990 ZNF542PQ5EBM4 170 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 PRAMEF14Q5SWL7 426 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 PIP5KL1Q5T9C9 394 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 TBC1D3GQ6DHY5 549 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 TBC1D3CQ6IPX1 549 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 ERN2Q76MJ5 926 aaKnown RBP8.57□□□□□ -1.04
THBS3-211ENST00000541990 TBC1D3Q8IZP1 549 aaPredicted RBP8.57□□□□□ -1.04
THBS3-211ENST00000541990 ZBTB44Q8NCP5 570 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 OR7G3Q8NG95 312 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 RIT1Q92963 219 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 TOE1Q96GM8 510 aaKnown RBP8.57□□□□□ -1.04
THBS3-211ENST00000541990 GAS2L1Q99501 681 aaPredicted RBP8.57□□□□□ -1.04
THBS3-211ENST00000541990 TPSD1Q9BZJ3 242 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 MS4A7Q9GZW8 240 aaPredicted RBP8.57□□□□□ -1.04
THBS3-211ENST00000541990 OR51B5Q9H339 312 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 BEX1Q9HBH7 125 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 DIABLOQ9NR28 239 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 NUDT15Q9NV35 164 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 GULP1Q9UBP9 304 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 NDOR1Q9UHB4 597 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 CORO2BQ9UQ03 480 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 PCDHGB7Q9Y5F8 929 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 SCN8AQ9UQD0 1980 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 A0A1W2PQF6 199 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 ARHGEF33A8MVX0 844 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 M0R3H8 397 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 SLC30A4O14863 429 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 TGFB1P01137 390 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 PRNPP04156 253 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 SRPRAP08240 638 aaKnown RBP8.57□□□□□ -1.04
THBS3-211ENST00000541990 ATXN8OSP0DMR3 200 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 ARAFP10398 606 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 PPIBP23284 216 aaKnown RBP8.57□□□□□ -1.04
THBS3-211ENST00000541990 C21orf58P58505 322 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 C2orf80Q0P641 193 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 MAP4K2Q12851 820 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 TMEM115Q12893 351 aaPredicted RBP8.57□□□□□ -1.04
THBS3-211ENST00000541990 GINS1Q14691 196 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 ZNF791Q3KP31 576 aaPredicted RBP8.57□□□□□ -1.04
THBS3-211ENST00000541990 LGALSLQ3ZCW2 172 aaPredicted RBP8.57□□□□□ -1.04
THBS3-211ENST00000541990 PLA1AQ53H76 456 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 HENMT1Q5T8I9 393 aaKnown RBP8.57□□□□□ -1.04
THBS3-211ENST00000541990 ANXA8L1Q5VT79 327 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 C16orf62Q7Z3J2 963 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 SFTPA2Q8IWL1 248 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 HORMAD2Q8N7B1 307 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 RNFT2Q96EX2 444 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 RBP7Q96R05 134 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 SMAD5Q99717 465 aaKnown RBP8.57□□□□□ -1.04
THBS3-211ENST00000541990 MED28Q9H204 178 aa8.57□□□□□ -1.04
THBS3-211ENST00000541990 EGLN3Q9H6Z9 239 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms