RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 TPM4P67936 248 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 CDK16Q00536 496 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 PDAP1Q13442 181 aaKnown RBP8.34□□□□□ -1.07
YBX3-211ENST00000541351 MLC1Q15049 377 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 TSC22D1Q15714 1073 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.34□□□□□ -1.07
YBX3-211ENST00000541351 ASTE1Q2TB18 679 aaPredicted RBP8.34□□□□□ -1.07
YBX3-211ENST00000541351 OR5M10Q6IEU7 315 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 FAHD2BQ6P2I3 314 aaPredicted RBP8.34□□□□□ -1.07
YBX3-211ENST00000541351 RAD9BQ6WBX8 426 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 ZNF615Q8N8J6 731 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 OR10D3Q8NH80 312 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 NANPQ8TBE9 248 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 FBXO17Q96EF6 278 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 PTCD3Q96EY7 689 aaKnown RBP8.34□□□□□ -1.07
YBX3-211ENST00000541351 FAHD2AQ96GK7 314 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 FRMD8P1Q9BZ68 369 aaPredicted RBP8.34□□□□□ -1.07
YBX3-211ENST00000541351 TSPY26PQ9H489 355 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 GOLPH3Q9H4A6 298 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 FN3KRPQ9HA64 309 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 ZBTB26Q9HCK0 441 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 ASIC3Q9UHC3 531 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 CORO1CQ9ULV4 474 aaPredicted RBP8.34□□□□□ -1.07
YBX3-211ENST00000541351 MAGEB16A2A368 324 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 NDUFB5O43674 189 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 LILRA1O75019 489 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 TFP02787 698 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 TPM1P09493 284 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 PRTN3P24158 256 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 CDKL1Q00532 357 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 DHX34Q14147 1143 aaKnown RBP8.33□□□□□ -1.08
YBX3-211ENST00000541351 NNATQ16517 81 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 ARL13AQ5H913 290 aaPredicted RBP8.33□□□□□ -1.08
YBX3-211ENST00000541351 C1QTNF12Q5T7M4 302 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 OR4C11Q6IEV9 310 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 OR52E8Q6IFG1 317 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 CES3Q6UWW8 571 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 ESPNLQ6ZVH7 1005 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 ZCCHC7Q8N3Z6 543 aaKnown RBP8.33□□□□□ -1.08
YBX3-211ENST00000541351 RNF10Q8N5U6 811 aaKnown RBP8.33□□□□□ -1.08
YBX3-211ENST00000541351 ZDHHC22Q8N966 263 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 SLC35B2Q8TB61 432 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.33□□□□□ -1.08
YBX3-211ENST00000541351 DOK4Q8TEW6 326 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 NEU4Q8WWR8 484 aaPredicted RBP8.33□□□□□ -1.08
YBX3-211ENST00000541351 SLC25A28Q96A46 364 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 CMTM7Q96FZ5 175 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 SLC35A4Q96G79 324 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 NAP1L5Q96NT1 182 aaPredicted RBP8.33□□□□□ -1.08
YBX3-211ENST00000541351 LRRC37BQ96QE4 947 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 FAM167BQ9BTA0 163 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 DSN1Q9H410 356 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 CNOT10Q9H9A5 744 aaKnown RBP8.33□□□□□ -1.08
YBX3-211ENST00000541351 RRAGDQ9NQL2 400 aaPredicted RBP8.33□□□□□ -1.08
YBX3-211ENST00000541351 TAS2R16Q9NYV7 291 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 KLHL13Q9P2N7 655 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 BCAP29Q9UHQ4 241 aa8.33□□□□□ -1.08
YBX3-211ENST00000541351 OR5H1A6NKK0 313 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 VSTM5A8MXK1 200 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 B9A039 149 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 TO15178 435 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 LYZL6O75951 148 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 IL33O95760 270 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 TPM3P06753 285 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 VSIG8P0DPA2 414 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 DAOP14920 347 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 IFNGR1P15260 489 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 ZNF17P17021 662 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 NT5EP21589 574 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 DRD5P21918 477 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 PPICP45877 212 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 SLC6A8P48029 635 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 KLF1Q13351 362 aaPredicted RBP8.32□□□□□ -1.08
YBX3-211ENST00000541351 SWI5Q1ZZU3 235 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 SH2D4BQ5SQS7 431 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 PAQR3Q6TCH7 311 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 CYP20A1Q6UW02 462 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 FRA10AC1Q70Z53 315 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 C1QL2Q7Z5L3 287 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 GALNT10Q86SR1 603 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 DENND6AQ8IWF6 608 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 FADS6Q8N9I5 356 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 FAM110BQ8TC76 370 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 WDR60Q8WVS4 1066 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 RGMAQ96B86 450 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 ZBTB8AQ96BR9 441 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 GPA33Q99795 319 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 SLC6A7Q99884 636 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 RSPO3Q9BXY4 272 aaPredicted RBP8.32□□□□□ -1.08
YBX3-211ENST00000541351 MS4A8Q9BY19 250 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 SYBUQ9NX95 663 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 EHD3Q9NZN3 535 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 PPIAL4AQ9Y536 164 aa8.32□□□□□ -1.08
YBX3-211ENST00000541351 J3QLI3 93 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 RTCAO00442 366 aaKnown RBP8.31□□□□□ -1.08
YBX3-211ENST00000541351 ADAMDEC1O15204 470 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 PHGDHO43175 533 aaKnown RBP8.31□□□□□ -1.08
YBX3-211ENST00000541351 BCAS2O75934 225 aaPredicted RBP8.31□□□□□ -1.08
YBX3-211ENST00000541351 PGM3O95394 542 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 TBX6O95947 436 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms