RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 NEIL3Q8TAT5 605 aa11.97□□□□□ -0.49
LTBR-208ENST00000541005 ZNF75CPQ92670 426 aaPredicted RBP11.97□□□□□ -0.49
LTBR-208ENST00000541005 MOAP1Q96BY2 351 aa11.97□□□□□ -0.49
LTBR-208ENST00000541005 SARAFQ96BY9 339 aa11.97□□□□□ -0.49
LTBR-208ENST00000541005 EFHD2Q96C19 240 aaPredicted RBP11.97□□□□□ -0.49
LTBR-208ENST00000541005 C7orf26Q96N11 449 aa11.97□□□□□ -0.49
LTBR-208ENST00000541005 TP63Q9H3D4 680 aaPredicted RBP11.97□□□□□ -0.49
LTBR-208ENST00000541005 GALNT9Q9HCQ5 603 aa11.97□□□□□ -0.49
LTBR-208ENST00000541005 EQTNQ9NQ60 294 aa11.97□□□□□ -0.49
LTBR-208ENST00000541005 FAM120CQ9NX05 1096 aaKnown RBP11.97□□□□□ -0.49
LTBR-208ENST00000541005 GIN1Q9NXP7 522 aa11.97□□□□□ -0.49
LTBR-208ENST00000541005 SPRR3Q9UBC9 169 aa11.97□□□□□ -0.49
LTBR-208ENST00000541005 PCDHGB3Q9Y5G1 929 aa11.97□□□□□ -0.49
LTBR-208ENST00000541005 KIAA1549Q9HCM3 1950 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 RNASET2O00584 256 aaKnown RBP11.96□□□□□ -0.49
LTBR-208ENST00000541005 ZNF195O14628 629 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 C6orf47O95873 294 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 ALDOCP09972 364 aaKnown RBP11.96□□□□□ -0.49
LTBR-208ENST00000541005 ACP2P11117 423 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 ESRRAP11474 423 aaPredicted RBP11.96□□□□□ -0.49
LTBR-208ENST00000541005 GABRA3P34903 492 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 PRIM2P49643 509 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 CLNS1AP54105 237 aaKnown RBP11.96□□□□□ -0.49
LTBR-208ENST00000541005 PSMD4P55036 377 aaKnown RBP11.96□□□□□ -0.49
LTBR-208ENST00000541005 WNT3P56703 355 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 NHSL2Q5HYW2 709 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 MAVSQ7Z434 540 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 SPATA19Q7Z5L4 167 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 GOLGA6L1Q8N7Z2 621 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 OR56A1Q8NGH5 318 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 PIWIL2Q8TC59 973 aaKnown RBP11.96□□□□□ -0.49
LTBR-208ENST00000541005 NUDT8Q8WV74 236 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 GNRHR2Q96P88 292 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 STACQ99469 402 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 DPY30Q9C005 99 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 OR2B2Q9GZK3 357 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 SLC6A15Q9H2J7 730 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 LDAHQ9H6V9 325 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 CXorf36Q9H7Y0 433 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 DUSP22Q9NRW4 184 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 ZCCHC3Q9NUD5 404 aaKnown RBP11.96□□□□□ -0.49
LTBR-208ENST00000541005 AIG1Q9NVV5 245 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 GPATCH2Q9NW75 528 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 MARCOQ9UEW3 520 aaPredicted RBP11.96□□□□□ -0.49
LTBR-208ENST00000541005 HRH3Q9Y5N1 445 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 CENPEQ02224 2701 aa11.96□□□□□ -0.49
LTBR-208ENST00000541005 GXYLT2A0PJZ3 443 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 FIGNL2A6NMB9 653 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 NPIPA2E9PIF3 369 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 NPIPA3F8WFD2 350 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 GNB5O14775 395 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 FADS1O60427 444 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 SCN2BO60939 215 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 SASH3O75995 380 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 SOX30O94993 753 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 KCNH1O95259 989 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 IGKV1D-16P01601 117 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 HMGN2P05204 90 aaKnown RBP11.95□□□□□ -0.5
LTBR-208ENST00000541005 NGFRP08138 427 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 EPHA3P29320 983 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 LCN1P31025 176 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 KIR3DL1P43629 444 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 CCT3P49368 545 aaKnown RBP11.95□□□□□ -0.5
LTBR-208ENST00000541005 SMSP52788 366 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 HBA1P69905 142 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 CRYZQ08257 329 aaKnown RBP11.95□□□□□ -0.5
LTBR-208ENST00000541005 ART3Q13508 389 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 DUSP5Q16690 384 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.95□□□□□ -0.5
LTBR-208ENST00000541005 GXYLT1Q4G148 440 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 XKRXQ6PP77 449 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 SZRD1Q7Z422 152 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 PLCZ1Q86YW0 608 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 MARVELD2Q8N4S9 558 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 SLC16A11Q8NCK7 471 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 FAM110BQ8TC76 370 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 GPR151Q8TDV0 419 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 ACTRT2Q8TDY3 377 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 DTNBP1Q96EV8 351 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 RMND5BQ96G75 393 aaPredicted RBP11.95□□□□□ -0.5
LTBR-208ENST00000541005 PNPLA3Q9NST1 481 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 MRPS18CQ9Y3D5 142 aaKnown RBP11.95□□□□□ -0.5
LTBR-208ENST00000541005 KLF2Q9Y5W3 355 aaPredicted RBP11.95□□□□□ -0.5
LTBR-208ENST00000541005 GPR45Q9Y5Y3 372 aa11.95□□□□□ -0.5
LTBR-208ENST00000541005 MAST4O15021 2626 aa11.94□□□□□ -0.5
LTBR-208ENST00000541005 IGLV3-32A0A0A0MS00 114 aa11.94□□□□□ -0.5
LTBR-208ENST00000541005 A1L4Q6 167 aa11.94□□□□□ -0.5
LTBR-208ENST00000541005 B4DXG7 233 aa11.94□□□□□ -0.5
LTBR-208ENST00000541005 E9PBE3 544 aa11.94□□□□□ -0.5
LTBR-208ENST00000541005 WDR1O75083 606 aa11.94□□□□□ -0.5
LTBR-208ENST00000541005 CBR3O75828 277 aa11.94□□□□□ -0.5
LTBR-208ENST00000541005 KRT16P08779 473 aa11.94□□□□□ -0.5
LTBR-208ENST00000541005 HOXD4P09016 255 aaPredicted RBP11.94□□□□□ -0.5
LTBR-208ENST00000541005 ALOX5P09917 674 aa11.94□□□□□ -0.5
LTBR-208ENST00000541005 KITP10721 976 aa11.94□□□□□ -0.5
LTBR-208ENST00000541005 ACVR2AP27037 513 aa11.94□□□□□ -0.5
LTBR-208ENST00000541005 SRD5A2P31213 254 aa11.94□□□□□ -0.5
LTBR-208ENST00000541005 PRKAG1P54619 331 aa11.94□□□□□ -0.5
LTBR-208ENST00000541005 PPP2R2AP63151 447 aa11.94□□□□□ -0.5
LTBR-208ENST00000541005 PHC1P78364 1004 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms