RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 OR7D2Q96RA2 312 aa16.13■□□□□ 0.17
CLSTN3-210ENST00000540931 CGREF1Q99674 301 aa16.13■□□□□ 0.17
CLSTN3-210ENST00000540931 CACYBPQ9HB71 228 aaKnown RBP16.13■□□□□ 0.17
CLSTN3-210ENST00000540931 ZNF71Q9NQZ8 489 aaPredicted RBP16.13■□□□□ 0.17
CLSTN3-210ENST00000540931 ARMCX1Q9P291 453 aa16.13■□□□□ 0.17
CLSTN3-210ENST00000540931 NME2P1O60361 137 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 TSPAN2O60636 221 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 STX11O75558 287 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 NEURL1O76050 574 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 CRYABP02511 175 aaKnown RBP16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 GSNP06396 782 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 ACP2P11117 423 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 HPGDP15428 266 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 GPX2P18283 190 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 CNR1P21554 472 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 NME2P22392 152 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 PTPN6P29350 595 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 CDKN2CP42773 168 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 CRATP43155 626 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 KCNC4Q03721 635 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 RGNQ15493 299 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 DUSP5Q16690 384 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 ARHGAP11BQ3KRB8 267 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 PRAMEF8Q5VWM4 474 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 PRAMEF7Q5VXH5 474 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 LYPD8Q6UX82 237 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 DLEU7Q6UYE1 221 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 NPSR1Q6W5P4 371 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 RNF130Q86XS8 419 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 MISPQ8IVT2 679 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 RBMXL3Q8N7X1 1067 aaKnown RBP16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 BCORP1Q8N888 145 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 SIMC1Q8NDZ2 872 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 ANKRD27Q96NW4 1050 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 TRNT1Q96Q11 434 aaKnown RBP16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 FAM173AQ9BQD7 235 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 OR51I1Q9H343 314 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 LIN28AQ9H9Z2 209 aaKnown RBP16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 ZBTB20Q9HC78 741 aaPredicted RBP16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 UBQLN4Q9NRR5 601 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 PLA2G3Q9NZ20 509 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 P2RX2Q9UBL9 471 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 PRDM4Q9UKN5 801 aa16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 NUP214P35658 2090 aaPredicted RBP16.12■□□□□ 0.17
CLSTN3-210ENST00000540931 ASPDHA6ND91 283 aa16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 H3BNH8 94 aa16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 KCNK2O95069 426 aa16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 BMP2P12643 396 aa16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 DSTNP60981 165 aa16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 RBBP4Q09028 425 aa16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 ZSWIM7Q19AV6 140 aa16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 RUNDC3AQ59EK9 446 aa16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 DCST2Q5T1A1 773 aa16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 REP15Q6BDI9 236 aa16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 HEPHL1Q6MZM0 1159 aa16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 DNAJC14Q6Y2X3 702 aaPredicted RBP16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 PACS2Q86VP3 889 aa16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 SPPL2AQ8TCT8 520 aa16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 XAGE5Q8WWM1 108 aa16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 LRRC58Q96CX6 371 aa16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 RMND5BQ96G75 393 aaPredicted RBP16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 C16orf58Q96GQ5 468 aa16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 THUMPD3Q9BV44 507 aaKnown RBP16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 TAGLN3Q9UI15 199 aa16.11■□□□□ 0.17
CLSTN3-210ENST00000540931 TRBV5-3A0A0A0MS03 114 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 MAN1A2O60476 641 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 DNAJA2O60884 412 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 RASAL1O95294 804 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 WISP1O95388 367 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 HOXB9P17482 250 aaPredicted RBP16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 ELAVL4P26378 380 aaKnown RBP16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 CRISP3P54108 245 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 NNATQ16517 81 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 SLC6A19Q695T7 634 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 SPINK14Q6IE38 97 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 CDS1Q92903 461 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 ADOQ96SZ5 270 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 YIPF4Q9BSR8 244 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 ANGPTL4Q9BY76 406 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 ARMC7Q9H6L4 198 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 METTL7AQ9H8H3 244 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 SH2D2AQ9NP31 389 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 AGPAT4Q9NRZ5 378 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 VAPAQ9P0L0 249 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 MAP10Q9P2G4 905 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 B4GALT7Q9UBV7 327 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 BOKQ9UMX3 212 aaPredicted RBP16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 PCDHGA10Q9Y5H3 936 aa16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 CHCHD2Q9Y6H1 151 aaPredicted RBP16.1■□□□□ 0.17
CLSTN3-210ENST00000540931 A0A1W2PQD3 144 aa16.09■□□□□ 0.17
CLSTN3-210ENST00000540931 ACOT7O00154 380 aa16.09■□□□□ 0.17
CLSTN3-210ENST00000540931 HMGN4O00479 90 aa16.09■□□□□ 0.17
CLSTN3-210ENST00000540931 FBP2O00757 339 aa16.09■□□□□ 0.17
CLSTN3-210ENST00000540931 SCDO00767 359 aa16.09■□□□□ 0.17
CLSTN3-210ENST00000540931 SLC28A2O43868 658 aa16.09■□□□□ 0.17
CLSTN3-210ENST00000540931 PDGFAP04085 211 aa16.09■□□□□ 0.17
CLSTN3-210ENST00000540931 OR12D1P0DN82 309 aa16.09■□□□□ 0.17
CLSTN3-210ENST00000540931 NR2F1P10589 423 aa16.09■□□□□ 0.17
CLSTN3-210ENST00000540931 TBXA2RP21731 343 aa16.09■□□□□ 0.17
CLSTN3-210ENST00000540931 ZNF630Q2M218 657 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms