RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 SNRNP40Q96DI7 357 aaKnown RBP14.23□□□□□ -0.13
DDB1-218ENST00000540784 NODALQ96S42 347 aa14.23□□□□□ -0.13
DDB1-218ENST00000540784 CCDC106Q9BWC9 280 aa14.23□□□□□ -0.13
DDB1-218ENST00000540784 ANGPTL4Q9BY76 406 aa14.23□□□□□ -0.13
DDB1-218ENST00000540784 SERHL2Q9H4I8 314 aa14.23□□□□□ -0.13
DDB1-218ENST00000540784 METTL7AQ9H8H3 244 aa14.23□□□□□ -0.13
DDB1-218ENST00000540784 TPT1P8Q9HAU6 139 aa14.23□□□□□ -0.13
DDB1-218ENST00000540784 SLAMF8Q9P0V8 285 aa14.23□□□□□ -0.13
DDB1-218ENST00000540784 KCNE3Q9Y6H6 103 aa14.23□□□□□ -0.13
DDB1-218ENST00000540784 ZFYVE26Q68DK2 2539 aa14.23□□□□□ -0.13
DDB1-218ENST00000540784 CNTRLQ7Z7A1 2325 aa14.23□□□□□ -0.13
DDB1-218ENST00000540784 ATRXP46100 2492 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 ASNA1O43681 348 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 SNX4O95219 450 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 IGKV1D-16P01601 117 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 CRYABP02511 175 aaKnown RBP14.22□□□□□ -0.13
DDB1-218ENST00000540784 CYP4B1P13584 511 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 ATP6V1C1P21283 382 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 CLK3P49761 638 aaKnown RBP14.22□□□□□ -0.13
DDB1-218ENST00000540784 KHKP50053 298 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 KCNJ2P63252 427 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 SNTA1Q13424 505 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 CYLC2Q14093 348 aaPredicted RBP14.22□□□□□ -0.13
DDB1-218ENST00000540784 GTDC1Q4AE62 458 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 CCNJQ5T5M9 372 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 PRAMEF20Q5VT98 475 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 SLC30A6Q6NXT4 461 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 FAM180AQ6UWF9 173 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 DLEU7Q6UYE1 221 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 PRICKLE2Q7Z3G6 844 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 PACS2Q86VP3 889 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 SNX32Q86XE0 403 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 DPP10Q8N608 796 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 POGLUT1Q8NBL1 392 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 OR2M7Q8NG81 312 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 RP9Q8TA86 221 aaKnown RBP14.22□□□□□ -0.13
DDB1-218ENST00000540784 GRHL3Q8TE85 626 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 RAB8BQ92930 207 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 TAAR6Q96RI8 345 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 DOHHQ9BU89 302 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 RAD21L1Q9H4I0 556 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 PROK2Q9HC23 129 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 AGPAT4Q9NRZ5 378 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 DEPPQ9NTK1 212 aa14.22□□□□□ -0.13
DDB1-218ENST00000540784 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.22□□□□□ -0.13
DDB1-218ENST00000540784 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.22□□□□□ -0.13
DDB1-218ENST00000540784 CHD6Q8TD26 2715 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 BOD1L1Q8NFC6 3051 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 NUP214P35658 2090 aaPredicted RBP14.21□□□□□ -0.13
DDB1-218ENST00000540784 EVPLLA8MZ36 301 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 FBP2O00757 339 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 ICOSLGO75144 302 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 UNC5CO95185 931 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 UTS2O95399 124 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 AK1P00568 194 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 PPIBP23284 216 aaKnown RBP14.21□□□□□ -0.13
DDB1-218ENST00000540784 LCN1P31025 176 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 CRATP43155 626 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 DNASE1L1P49184 302 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 PMP22Q01453 160 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 PLGLB1Q02325 96 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 NFYCQ13952 458 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.21□□□□□ -0.13
DDB1-218ENST00000540784 ARHGAP11BQ3KRB8 267 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 COX20Q5RI15 118 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 DCST2Q5T1A1 773 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.21□□□□□ -0.13
DDB1-218ENST00000540784 TMEM81Q6P7N7 255 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 C16orf62Q7Z3J2 963 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 GALNT10Q86SR1 603 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 RETREG3Q86VR2 466 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 ANKS4BQ8N8V4 417 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 ZFP62Q8NB50 900 aaPredicted RBP14.21□□□□□ -0.13
DDB1-218ENST00000540784 PCYOX1LQ8NBM8 494 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 OR52N2Q8NGI0 321 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 CPT1CQ8TCG5 803 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 AURKBQ96GD4 344 aaPredicted RBP14.21□□□□□ -0.13
DDB1-218ENST00000540784 JSRP1Q96MG2 331 aaPredicted RBP14.21□□□□□ -0.13
DDB1-218ENST00000540784 SDF2Q99470 211 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 MYLK2Q9H1R3 596 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 IL1RL2Q9HB29 575 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 ASF1BQ9NVP2 202 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 FBXO34Q9NWN3 711 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 SLC25A37Q9NYZ2 338 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 KLRF1Q9NZS2 232 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 VAPAQ9P0L0 249 aa14.21□□□□□ -0.13
DDB1-218ENST00000540784 A0A0G2JMM0 328 aa14.2□□□□□ -0.14
DDB1-218ENST00000540784 A0A1W2PPB8 328 aa14.2□□□□□ -0.14
DDB1-218ENST00000540784 A0A1W2PRS3 328 aa14.2□□□□□ -0.14
DDB1-218ENST00000540784 PINLYPA6NC86 204 aa14.2□□□□□ -0.14
DDB1-218ENST00000540784 C2orf72A6NCS6 295 aa14.2□□□□□ -0.14
DDB1-218ENST00000540784 PRAMEF25A6NGN4 478 aa14.2□□□□□ -0.14
DDB1-218ENST00000540784 BBIP1A8MTZ0 92 aa14.2□□□□□ -0.14
DDB1-218ENST00000540784 KIR3DP1A8MWS1 328 aa14.2□□□□□ -0.14
DDB1-218ENST00000540784 DCTN3O75935 186 aa14.2□□□□□ -0.14
DDB1-218ENST00000540784 COX4I1P13073 169 aa14.2□□□□□ -0.14
DDB1-218ENST00000540784 ALDH6A1Q02252 535 aaKnown RBP14.2□□□□□ -0.14
DDB1-218ENST00000540784 PRR30Q53SZ7 412 aaPredicted RBP14.2□□□□□ -0.14
DDB1-218ENST00000540784 RUNDC3AQ59EK9 446 aa14.2□□□□□ -0.14
DDB1-218ENST00000540784 COQ5Q5HYK3 327 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms