RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 DGAT2L6Q6ZPD8 337 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 TMEM179BQ7Z7N9 219 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 RCBTB1Q8NDN9 531 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 SIMC1Q8NDZ2 872 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 OR52R1Q8NGF1 315 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 FKBP10Q96AY3 582 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 ISOC1Q96CN7 298 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 OR6C1Q96RD1 312 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 PIP5K1AQ99755 562 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 LMF2Q9BU23 707 aaKnown RBP15.72■□□□□ 0.11
COPS3-212ENST00000539941 MTHFD2LQ9H903 347 aaPredicted RBP15.72■□□□□ 0.11
COPS3-212ENST00000539941 NCDNQ9UBB6 729 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 U3KQV3 271 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 CCDC88CQ9P219 2028 aa15.72■□□□□ 0.11
COPS3-212ENST00000539941 IGKV3D-11A0A0A0MRZ8 115 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 LNP1A1A4G5 178 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 H0YAE9 185 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 HYAL3O43820 417 aaPredicted RBP15.71■□□□□ 0.11
COPS3-212ENST00000539941 PRAMEF2O60811 474 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 NKX2-2O95096 273 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 OXSR1O95747 527 aaPredicted RBP15.71■□□□□ 0.11
COPS3-212ENST00000539941 RECKO95980 971 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 ALPPP05187 535 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 GUSBP08236 651 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 THRBP10828 461 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 TNFRSF1BP20333 461 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 FUT7Q11130 342 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 PUM1Q14671 1186 aaKnown RBP eCLIP15.71■□□□□ 0.11
COPS3-212ENST00000539941 PRAMEF17Q5VTA0 474 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 KRT80Q6KB66 452 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 CARM1Q86X55 608 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 DHRSXQ8N5I4 330 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 COX18Q8N8Q8 333 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.71■□□□□ 0.11
COPS3-212ENST00000539941 PTCHD1Q96NR3 888 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 PSD2Q9BQI7 771 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 AMBRA1Q9C0C7 1298 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 SLC7A5P2Q9GIP4 190 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 ZNF350Q9GZX5 532 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 CACYBPQ9HB71 228 aaKnown RBP15.71■□□□□ 0.11
COPS3-212ENST00000539941 NECTIN3Q9NQS3 549 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 POLE3Q9NRF9 147 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 SLC9A8Q9Y2E8 581 aa15.71■□□□□ 0.11
COPS3-212ENST00000539941 MAGED1Q9Y5V3 778 aaPredicted RBP15.71■□□□□ 0.11
COPS3-212ENST00000539941 TRIM64BA6NI03 449 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 JRKO75564 520 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 LGI1O95970 557 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 ALBP02768 609 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 INHBBP09529 407 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 PRKAR1BP31321 381 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 RRM2P31350 389 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 CAPGP40121 348 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 PDX1P52945 283 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 CHRNEQ04844 493 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 ZNF155Q12901 538 aaPredicted RBP15.7■□□□□ 0.1
COPS3-212ENST00000539941 ZNHIT3Q15649 155 aaPredicted RBP15.7■□□□□ 0.1
COPS3-212ENST00000539941 SLC36A3Q495N2 470 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 PHF19Q5T6S3 580 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 MLIPQ5VWP3 458 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 FRRS1Q6ZNA5 592 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 WDR53Q7Z5U6 358 aaPredicted RBP15.7■□□□□ 0.1
COPS3-212ENST00000539941 ZNF605Q86T29 641 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 CYP4Z1Q86W10 505 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 OR7G1Q8NGA0 311 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 SDF2Q99470 211 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 TGIF2Q9GZN2 237 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 PARD6AQ9NPB6 346 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 FTSJ1Q9UET6 329 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 C3orf18Q9UK00 162 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 KCND3Q9UK17 655 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 IFT52Q9Y366 437 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 WDR45Q9Y484 360 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 ORC6Q9Y5N6 252 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 HEMK1Q9Y5R4 338 aaPredicted RBP15.7■□□□□ 0.1
COPS3-212ENST00000539941 LYVE1Q9Y5Y7 322 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 DYRK3O43781 588 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 IFNA16P05015 189 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 CSTF2P33240 577 aaKnown RBP eCLIP15.7■□□□□ 0.1
COPS3-212ENST00000539941 RORAP35398 523 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 PCYT1AP49585 367 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 EMDP50402 254 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 HMGA2P52926 109 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 RAD23AP54725 363 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 SPIBQ01892 262 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 ZFP36L1Q07352 338 aaKnown RBP15.7■□□□□ 0.1
COPS3-212ENST00000539941 DUSP8Q13202 625 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 ZNF267Q14586 743 aaPredicted RBP15.7■□□□□ 0.1
COPS3-212ENST00000539941 IL11RAQ14626 422 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 DCST2Q5T1A1 773 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 PRR23CQ6ZRP0 262 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 HS3ST5Q8IZT8 346 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 RSPO3Q9BXY4 272 aaPredicted RBP15.7■□□□□ 0.1
COPS3-212ENST00000539941 SAP130Q9H0E3 1048 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 FOLH1BQ9HBA9 442 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 ERGIC3Q9Y282 383 aa15.7■□□□□ 0.1
COPS3-212ENST00000539941 SEC16AO15027 2179 aa15.69■□□□□ 0.1
COPS3-212ENST00000539941 IGLV3-12A0A075B6K2 115 aa15.69■□□□□ 0.1
COPS3-212ENST00000539941 TNFRSF11BO00300 401 aa15.69■□□□□ 0.1
COPS3-212ENST00000539941 NME6O75414 186 aaPredicted RBP15.69■□□□□ 0.1
COPS3-212ENST00000539941 STX11O75558 287 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms