RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 MRPS18CQ9Y3D5 142 aaKnown RBP15.23■□□□□ 0.03
DDB1-215ENST00000539712 OR10H1Q9Y4A9 318 aa15.23■□□□□ 0.03
DDB1-215ENST00000539712 V9GYY5 206 aaPredicted RBP15.23■□□□□ 0.03
DDB1-215ENST00000539712 DOCK7Q96N67 2140 aa15.23■□□□□ 0.03
DDB1-215ENST00000539712 F8P00451 2351 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 MBD3L4A6NDZ8 208 aaPredicted RBP15.22■□□□□ 0.03
DDB1-215ENST00000539712 MBD3L3A6NE82 208 aaPredicted RBP15.22■□□□□ 0.03
DDB1-215ENST00000539712 MBD3L5A6NJ08 208 aaPredicted RBP15.22■□□□□ 0.03
DDB1-215ENST00000539712 PIP5K1BO14986 540 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 AKAP10O43572 662 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 IGKV1D-16P01601 117 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 NEFHP12036 1026 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 BCKDHAP12694 445 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 CAPN3P20807 821 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 IL12BP29460 328 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 SRD5A2P31213 254 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 EVI2BP34910 448 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 STARP49675 285 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 LHX2P50458 406 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 RPL38P63173 70 aaKnown RBP15.22■□□□□ 0.03
DDB1-215ENST00000539712 SNTB1Q13884 538 aaKnown RBP15.22■□□□□ 0.03
DDB1-215ENST00000539712 XKR7Q5GH72 579 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 SH2D4BQ5SQS7 431 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 MREGQ8N565 214 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 FADS6Q8N9I5 356 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 C9orf106Q8NAJ2 232 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 OR14L1PQ8NHC6 308 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 MBD3L2Q8NHZ7 208 aaPredicted RBP15.22■□□□□ 0.03
DDB1-215ENST00000539712 GIMAP5Q96F15 307 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 C3orf30Q96M34 536 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 TRIB1Q96RU8 372 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 TUBA1CQ9BQE3 449 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 IQCGQ9H095 443 aaKnown RBP15.22■□□□□ 0.03
DDB1-215ENST00000539712 ZNF629Q9UEG4 869 aaPredicted RBP15.22■□□□□ 0.03
DDB1-215ENST00000539712 CBLCQ9ULV8 474 aa15.22■□□□□ 0.03
DDB1-215ENST00000539712 AKAP6Q13023 2319 aa15.21■□□□□ 0.03
DDB1-215ENST00000539712 GXYLT2A0PJZ3 443 aa15.21■□□□□ 0.03
DDB1-215ENST00000539712 IL33O95760 270 aa15.21■□□□□ 0.03
DDB1-215ENST00000539712 BPGMP07738 259 aa15.21■□□□□ 0.03
DDB1-215ENST00000539712 POU3F2P20265 443 aaPredicted RBP15.21■□□□□ 0.03
DDB1-215ENST00000539712 BMP5P22003 454 aa15.21■□□□□ 0.03
DDB1-215ENST00000539712 KRT20P35900 424 aa15.21■□□□□ 0.03
DDB1-215ENST00000539712 CLDN18P56856 261 aa15.21■□□□□ 0.03
DDB1-215ENST00000539712 IFFO1Q0D2I5 559 aa15.21■□□□□ 0.03
DDB1-215ENST00000539712 HSPB3Q12988 150 aa15.21■□□□□ 0.03
DDB1-215ENST00000539712 FBXL19-AS1Q494R0 122 aa15.21■□□□□ 0.03
DDB1-215ENST00000539712 ARSKQ6UWY0 536 aa15.21■□□□□ 0.03
DDB1-215ENST00000539712 PLXDC2Q6UX71 529 aa15.21■□□□□ 0.03
DDB1-215ENST00000539712 APOOLQ6UXV4 268 aa15.21■□□□□ 0.03
DDB1-215ENST00000539712 UCN2Q96RP3 112 aa15.21■□□□□ 0.03
DDB1-215ENST00000539712 ZDHHC2Q9UIJ5 367 aa15.21■□□□□ 0.03
DDB1-215ENST00000539712 TMED5Q9Y3A6 229 aa15.21■□□□□ 0.03
DDB1-215ENST00000539712 PDPK1O15530 556 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 ZNF500O60304 480 aaPredicted RBP15.2■□□□□ 0.02
DDB1-215ENST00000539712 SLU7O95391 586 aaKnown RBP15.2■□□□□ 0.02
DDB1-215ENST00000539712 CHEK2O96017 543 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 IL2RAP01589 272 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 GABRA3P34903 492 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 MRPS22P82650 360 aaKnown RBP15.2■□□□□ 0.02
DDB1-215ENST00000539712 ZNF844Q08AG5 666 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 FOXF2Q12947 444 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 SF3B4Q15427 424 aaKnown RBP eCLIP15.2■□□□□ 0.026e-9■■■■□ 21.3
DDB1-215ENST00000539712 TESK1Q15569 626 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 DECR1Q16698 335 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 GALNTL6Q49A17 601 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 EXOSC6Q5RKV6 272 aaKnown RBP15.2■□□□□ 0.02
DDB1-215ENST00000539712 IFNEQ86WN2 208 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 DDIASQ8IXT1 998 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 OR2M3Q8NG83 312 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 AGR3Q8TD06 166 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 NUDT8Q8WV74 236 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 PIK3R3Q92569 461 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 PPCDCQ96CD2 204 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 PARD6BQ9BYG5 372 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 DSN1Q9H410 356 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 ACSS1Q9NUB1 689 aaPredicted RBP15.2■□□□□ 0.02
DDB1-215ENST00000539712 FAM120CQ9NX05 1096 aaKnown RBP15.2■□□□□ 0.02
DDB1-215ENST00000539712 JKAMPQ9P055 326 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 ABCG2Q9UNQ0 655 aa15.2■□□□□ 0.02
DDB1-215ENST00000539712 DVL2O14641 736 aa15.19■□□□□ 0.02
DDB1-215ENST00000539712 SCO2O43819 266 aa15.19■□□□□ 0.02
DDB1-215ENST00000539712 NKX2-2O95096 273 aa15.19■□□□□ 0.02
DDB1-215ENST00000539712 PRPS2P11908 318 aa15.19■□□□□ 0.02
DDB1-215ENST00000539712 ZNF708P17019 499 aa15.19■□□□□ 0.02
DDB1-215ENST00000539712 EFNA1P20827 205 aaPredicted RBP15.19■□□□□ 0.02
DDB1-215ENST00000539712 CHMP24386 653 aa15.19■□□□□ 0.02
DDB1-215ENST00000539712 DPP4P27487 766 aa15.19■□□□□ 0.02
DDB1-215ENST00000539712 AGFG1P52594 562 aaKnown RBP15.19■□□□□ 0.02
DDB1-215ENST00000539712 CLDN15P56746 228 aa15.19■□□□□ 0.02
DDB1-215ENST00000539712 SRYQ05066 204 aa15.19■□□□□ 0.02
DDB1-215ENST00000539712 EXOC3L1Q86VI1 746 aa15.19■□□□□ 0.02
DDB1-215ENST00000539712 ZNF559Q9BR84 538 aa15.19■□□□□ 0.02
DDB1-215ENST00000539712 EML4Q9HC35 981 aaKnown RBP15.19■□□□□ 0.02
DDB1-215ENST00000539712 Q9N2J8 555 aa15.19■□□□□ 0.02
DDB1-215ENST00000539712 EQTNQ9NQ60 294 aa15.19■□□□□ 0.02
DDB1-215ENST00000539712 SIRT3Q9NTG7 399 aaPredicted RBP15.19■□□□□ 0.02
DDB1-215ENST00000539712 MED11Q9P086 117 aa15.19■□□□□ 0.02
DDB1-215ENST00000539712 SH3BP4Q9P0V3 963 aa15.19■□□□□ 0.02
DDB1-215ENST00000539712 CLCF1Q9UBD9 225 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms