RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 GTPBP2Q9BX10 602 aaKnown RBP19.03■□□□□ 0.64
TMEM260-203ENST00000539559 MRPS18AQ9NVS2 196 aaKnown RBP19.03■□□□□ 0.64
TMEM260-203ENST00000539559 SLC23A2Q9UGH3 650 aa19.03■□□□□ 0.64
TMEM260-203ENST00000539559 UNC80Q8N2C7 3258 aa19.02■□□□□ 0.64
TMEM260-203ENST00000539559 LEUTXA8MZ59 168 aa19.02■□□□□ 0.64
TMEM260-203ENST00000539559 HMGN2P05204 90 aaKnown RBP19.02■□□□□ 0.64
TMEM260-203ENST00000539559 OR10A3P58181 314 aa19.02■□□□□ 0.64
TMEM260-203ENST00000539559 STXBP1P61764 594 aaKnown RBP19.02■□□□□ 0.64
TMEM260-203ENST00000539559 MESP2Q0VG99 397 aa19.02■□□□□ 0.64
TMEM260-203ENST00000539559 NDUFA9Q16795 377 aa19.02■□□□□ 0.64
TMEM260-203ENST00000539559 EOGTQ5NDL2 527 aa19.02■□□□□ 0.64
TMEM260-203ENST00000539559 NDUFAF5Q5TEU4 345 aa19.02■□□□□ 0.64
TMEM260-203ENST00000539559 KRT74Q7RTS7 529 aa19.02■□□□□ 0.64
TMEM260-203ENST00000539559 CCDC28AQ8IWP9 274 aa19.02■□□□□ 0.64
TMEM260-203ENST00000539559 CCDC116Q8IYX3 515 aa19.02■□□□□ 0.64
TMEM260-203ENST00000539559 MRPL43Q8N983 215 aaKnown RBP19.02■□□□□ 0.64
TMEM260-203ENST00000539559 ZNF649Q9BS31 505 aa19.02■□□□□ 0.64
TMEM260-203ENST00000539559 MED20Q9H944 212 aa19.02■□□□□ 0.64
TMEM260-203ENST00000539559 PTGFRNQ9P2B2 879 aa19.02■□□□□ 0.64
TMEM260-203ENST00000539559 CDH23Q9H251 3354 aa19.02■□□□□ 0.64
TMEM260-203ENST00000539559 COL4A3Q01955 1670 aa19.02■□□□□ 0.64
TMEM260-203ENST00000539559 HIDE1A8MVS5 230 aa19.02■□□□□ 0.63
TMEM260-203ENST00000539559 HLA-DPB1P04440 258 aa19.02■□□□□ 0.63
TMEM260-203ENST00000539559 CTNNB1P35222 781 aa19.02■□□□□ 0.63
TMEM260-203ENST00000539559 PLPP4Q5VZY2 271 aa19.02■□□□□ 0.63
TMEM260-203ENST00000539559 SIRT6Q8N6T7 355 aa19.02■□□□□ 0.63
TMEM260-203ENST00000539559 OR51G2Q8NGK0 314 aa19.02■□□□□ 0.63
TMEM260-203ENST00000539559 FCRL4Q96PJ5 515 aa19.02■□□□□ 0.63
TMEM260-203ENST00000539559 ZNF222Q9UK12 451 aa19.02■□□□□ 0.63
TMEM260-203ENST00000539559 NUP210Q8TEM1 1887 aaPredicted RBP19.02■□□□□ 0.63
TMEM260-203ENST00000539559 KDM4EB2RXH2 506 aaPredicted RBP19.01■□□□□ 0.63
TMEM260-203ENST00000539559 PGRMC2O15173 223 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 EIF4EP06730 217 aaKnown RBP19.01■□□□□ 0.63
TMEM260-203ENST00000539559 FUT1P19526 365 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 TBXA2RP21731 343 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 RNF144AP50876 292 aaPredicted RBP19.01■□□□□ 0.63
TMEM260-203ENST00000539559 FZD5Q13467 585 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 DUSP6Q16828 381 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 PLA2G15Q8NCC3 412 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 SMAP2Q8WU79 429 aaPredicted RBP19.01■□□□□ 0.63
TMEM260-203ENST00000539559 SMG7Q92540 1137 aaKnown RBP19.01■□□□□ 0.63
TMEM260-203ENST00000539559 KLHL31Q9H511 634 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 SPHK2Q9NRA0 654 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 LIPT1Q9Y234 373 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 NDUFS4O43181 175 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 HOXB3P14651 431 aaPredicted RBP19.01■□□□□ 0.63
TMEM260-203ENST00000539559 NNMTP40261 264 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 MAPK9P45984 424 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 ADAM15Q13444 863 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 TEAD2Q15562 447 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 WDR45BQ5MNZ6 344 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 TMEM240Q5SV17 173 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 LCTLQ6UWM7 567 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 TMEM107Q6UX40 140 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 ZNF793Q6ZN11 406 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 CREB3L2Q70SY1 520 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 RRM2BQ7LG56 351 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 SP7Q8TDD2 431 aaPredicted RBP19.01■□□□□ 0.63
TMEM260-203ENST00000539559 TFGQ92734 400 aaPredicted RBP19.01■□□□□ 0.63
TMEM260-203ENST00000539559 COQ7Q99807 217 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 AICDAQ9GZX7 198 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 NARFLQ9H6Q4 476 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 ZDHHC4Q9NPG8 344 aa19.01■□□□□ 0.63
TMEM260-203ENST00000539559 IMP3Q9NV31 184 aaKnown RBP19.01■□□□□ 0.63
TMEM260-203ENST00000539559 KIAA1549LQ6ZVL6 1849 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 EEF1E1O43324 174 aaKnown RBP19■□□□□ 0.63
TMEM260-203ENST00000539559 SHC1P29353 583 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 FRKP42685 505 aaPredicted RBP19■□□□□ 0.63
TMEM260-203ENST00000539559 KIAA1211LQ6NV74 962 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 NUDT13Q86X67 352 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 KLHL36Q8N4N3 616 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 RAD51AP1Q96B01 352 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 ARSGQ96EG1 525 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 COQ10AQ96MF6 247 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 BBS4Q96RK4 519 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 AIF1LQ9BQI0 150 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 ABCG5Q9H222 651 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 CDCP1Q9H5V8 836 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 UCKL1Q9NWZ5 548 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 CHP2O43745 196 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 AHRP35869 848 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 SSR2P43308 183 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 LBX1P52954 281 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 ZNF311Q5JNZ3 666 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 AADACL4Q5VUY2 407 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 MZT2AQ6P582 158 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 PSRC1Q6PGN9 363 aaPredicted RBP19■□□□□ 0.63
TMEM260-203ENST00000539559 POGLUT1Q8NBL1 392 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 OR6C4Q8NGE1 309 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 GNPDA2Q8TDQ7 276 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 SETD7Q8WTS6 366 aaKnown RBP19■□□□□ 0.63
TMEM260-203ENST00000539559 NUS1Q96E22 293 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 OR52A5Q9H2C5 316 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 POLMQ9NP87 494 aaPredicted RBP19■□□□□ 0.63
TMEM260-203ENST00000539559 NUDT15Q9NV35 164 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 TAS2R7Q9NYW3 318 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 NFKBIL1Q9UBC1 381 aaPredicted RBP19■□□□□ 0.63
TMEM260-203ENST00000539559 NCKAP1Q9Y2A7 1128 aa19■□□□□ 0.63
TMEM260-203ENST00000539559 SNTNA6NMZ2 147 aa18.99■□□□□ 0.63
TMEM260-203ENST00000539559 SGK494L7N484 410 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms