RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 MBD3L2Q8NHZ7 208 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ZPLD1Q8TCW7 415 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 AGR3Q8TD06 166 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 FCRL1Q96LA6 429 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 SFXN2Q96NB2 322 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 CCT7Q99832 543 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 SH3GL2Q99962 352 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 SLC24A3Q9HC58 644 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 Q9N2J8 555 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 EQTNQ9NQ60 294 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 PPP4R1LQ9P1A2 415 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ZNF629Q9UEG4 869 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 LGALS13Q9UHV8 139 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 SYT5O00445 386 aa17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 LSM1O15116 133 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 NPHS1O60500 1241 aa17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 POU3F2P20265 443 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 DPP4P27487 766 aa17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 GPC1P35052 558 aa17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 KIR2DL3P43628 341 aa17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 STX5Q13190 355 aa17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 AAGABQ6PD74 315 aa17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 TCP10LQ8TDR4 215 aa17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 AENQ8WTP8 325 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 TWIST2Q8WVJ9 160 aa17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 PPCDCQ96CD2 204 aa17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 LMF2Q9BU23 707 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 DSN1Q9H410 356 aa17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 REEP4Q9H6H4 257 aa17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 SH3BP4Q9P0V3 963 aa17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 TRAF6Q9Y4K3 522 aa17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 V9GYY5 206 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1A-212ENST00000539372 AKAP9Q99996 3911 aa17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 GXYLT2A0PJZ3 443 aa17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 PIP5K1BO14986 540 aa17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ZIC3O60481 467 aa17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 CTSSP25774 331 aa17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 GABRA3P34903 492 aa17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 LHX2P50458 406 aa17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 DGKQP52824 942 aa17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 UGT3A2Q3SY77 523 aa17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 RNF165Q6ZSG1 346 aa17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 SZRD1Q7Z422 152 aa17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 NRGNQ92686 78 aa17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 RNASE6Q93091 150 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 DTNBP1Q96EV8 351 aa17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 RTN4RQ9BZR6 473 aa17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 EML4Q9HC35 981 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 CRIM1Q9NZV1 1036 aa17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 MED11Q9P086 117 aa17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 GIMAP2Q9UG22 337 aa17.29■□□□□ 0.36
TNFRSF1A-212ENST00000539372 CLCA1A8K7I4 914 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 EEF1E1-BLOC1S5C9J1V9 151 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 EEF1E1O43324 174 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 FADS1O60427 444 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 IL33O95760 270 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 FGF4P08620 206 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 TMIGD3P0DMS9 266 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 CREB1P16220 341 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 EFNA1P20827 205 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 PRKAG1P54619 331 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 MANFP55145 182 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 CLDN18P56856 261 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 FOXF2Q12947 444 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 MARCH3Q86UD3 253 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 FADS6Q8N9I5 356 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 OR2M3Q8NG83 312 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 FBXO30Q8TB52 745 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 PIK3R3Q92569 461 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 LRRC46Q96FV0 321 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 G6PC3Q9BUM1 346 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ROPN1BQ9BZX4 212 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ROPN1Q9HAT0 212 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 MRTO4Q9UKD2 239 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ABCG2Q9UNQ0 655 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 TMED5Q9Y3A6 229 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 MRPS18CQ9Y3D5 142 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 CCDC168Q8NDH2 2452 aa17.28■□□□□ 0.36
TNFRSF1A-212ENST00000539372 UTS2O95399 124 aa17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 IGKV1D-16P01601 117 aa17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 PRPS2P11908 318 aa17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 BCKDHAP12694 445 aa17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ARRB2P32121 409 aa17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 OPRM1P35372 400 aa17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 DSCR4P56555 118 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 B3GALT5-AS1P59052 145 aa17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 PDE7AQ13946 482 aa17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 FBXL19-AS1Q494R0 122 aa17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 EMBQ6PCB8 327 aa17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 GALNT10Q86SR1 603 aa17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 EXOC3L1Q86VI1 746 aa17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ZFP28Q8NHY6 868 aa17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 GPR151Q8TDV0 419 aa17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 DUSP19Q8WTR2 217 aa17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ZBED6CLQ96FA7 236 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 RMND5BQ96G75 393 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ZNF764Q96H86 408 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 C3orf14Q9HBI5 128 aa17.27■□□□□ 0.36
TNFRSF1A-212ENST00000539372 SDHAF3Q9NRP4 125 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms