RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 SLITRK5O94991 958 aa11.31□□□□□ -0.6
VAMP1-206ENST00000538970 PSMG1O95456 288 aa11.31□□□□□ -0.6
VAMP1-206ENST00000538970 CD53P19397 219 aa11.31□□□□□ -0.6
VAMP1-206ENST00000538970 CPOXP36551 454 aa11.31□□□□□ -0.6
VAMP1-206ENST00000538970 MC3RP41968 323 aa11.31□□□□□ -0.6
VAMP1-206ENST00000538970 FOXA1P55317 472 aa11.31□□□□□ -0.6
VAMP1-206ENST00000538970 DSCR4P56555 118 aaPredicted RBP11.31□□□□□ -0.6
VAMP1-206ENST00000538970 BTKQ06187 659 aa11.31□□□□□ -0.6
VAMP1-206ENST00000538970 ZNF763Q0D2J5 394 aa11.31□□□□□ -0.6
VAMP1-206ENST00000538970 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.31□□□□□ -0.6
VAMP1-206ENST00000538970 ACMSDQ8TDX5 336 aa11.31□□□□□ -0.6
VAMP1-206ENST00000538970 ZNF592Q92610 1267 aa11.31□□□□□ -0.6
VAMP1-206ENST00000538970 BBS4Q96RK4 519 aa11.31□□□□□ -0.6
VAMP1-206ENST00000538970 MID1IP1Q9NPA3 183 aa11.31□□□□□ -0.6
VAMP1-206ENST00000538970 PPP4R1LQ9P1A2 415 aa11.31□□□□□ -0.6
VAMP1-206ENST00000538970 TESMINQ9Y4I5 508 aa11.31□□□□□ -0.6
VAMP1-206ENST00000538970 ABCA4P78363 2273 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 A0A087WV62 115 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 SLC22A20A6NK97 555 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 GOLGA8RI6L899 631 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 MSTNO14793 375 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 FADS1O60427 444 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 JUNP05412 331 aaKnown RBP11.3□□□□□ -0.6
VAMP1-206ENST00000538970 CRHP06850 196 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 GSTA1P08263 222 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 PEPDP12955 493 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 HOXC12P31275 282 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 NCBP2P52298 156 aaKnown RBP eCLIP11.3□□□□□ -0.6
VAMP1-206ENST00000538970 CLDN15P56746 228 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 OR2A2Q6IF42 318 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 FAM71E1Q6IPT2 247 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 TMEM107Q6UX40 140 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 TRMT10CQ7L0Y3 403 aaKnown RBP11.3□□□□□ -0.6
VAMP1-206ENST00000538970 P4HA3Q7Z4N8 544 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 KRTAP1-3Q8IUG1 177 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 UBQLNLQ8IYU4 475 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 OR2L13Q8N349 312 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 OR2M3Q8NG83 312 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 CDC26Q8NHZ8 85 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 MZB1Q8WU39 189 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 RTN4RQ9BZR6 473 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 DSN1Q9H410 356 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 MYNNQ9NPC7 610 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 MIEF1Q9NQG6 463 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 FLRT3Q9NZU0 649 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 EMCNQ9ULC0 261 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 GRID1Q9ULK0 1009 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 ABCG2Q9UNQ0 655 aa11.3□□□□□ -0.6
VAMP1-206ENST00000538970 C19orf53Q9UNZ5 99 aaPredicted RBP11.3□□□□□ -0.6
VAMP1-206ENST00000538970 G3V2L1 256 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 UPK1AO00322 258 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 PYGBP11216 843 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 HK1P19367 917 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 NTSP30990 170 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 CCKARP32238 428 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 PCYT1AP49585 367 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 C2orf80Q0P641 193 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 STX5Q13190 355 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 GANABQ14697 944 aaKnown RBP11.29□□□□□ -0.6
VAMP1-206ENST00000538970 CYP27C1Q4G0S4 372 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 SPDYAQ5MJ70 313 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 SH2D4BQ5SQS7 431 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 RAET1LQ5VY80 246 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 VWA1Q6PCB0 445 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 CHMP1BQ7LBR1 199 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 MEIOBQ8N635 442 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 CCNYL1Q8N7R7 359 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 CNEP1R1Q8N9A8 125 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 FIG4Q92562 907 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 STARD4Q96DR4 205 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 LMF2Q9BU23 707 aaKnown RBP11.29□□□□□ -0.6
VAMP1-206ENST00000538970 GLIPR2Q9H4G4 154 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 NEUROD4Q9HD90 331 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 Q9N2J8 555 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 DDX18Q9NVP1 670 aaKnown RBP11.29□□□□□ -0.6
VAMP1-206ENST00000538970 BEX4Q9NWD9 120 aaPredicted RBP11.29□□□□□ -0.6
VAMP1-206ENST00000538970 FAM120CQ9NX05 1096 aaKnown RBP11.29□□□□□ -0.6
VAMP1-206ENST00000538970 TAS2R7Q9NYW3 318 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 MED11Q9P086 117 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 PSMC3IPQ9P2W1 217 aaPredicted RBP11.29□□□□□ -0.6
VAMP1-206ENST00000538970 NDRG3Q9UGV2 375 aa11.29□□□□□ -0.6
VAMP1-206ENST00000538970 POLR3HQ9Y535 204 aaPredicted RBP11.29□□□□□ -0.6
VAMP1-206ENST00000538970 FBN1P35555 2871 aaKnown RBP11.29□□□□□ -0.6
VAMP1-206ENST00000538970 OR2M5A3KFT3 312 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 H0YC42 278 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 CASKO14936 926 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 SEC14L5O43304 696 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 SMNDC1O75940 238 aaKnown RBP eCLIP11.28□□□□□ -0.6
VAMP1-206ENST00000538970 RSL1D1O76021 490 aaKnown RBP11.28□□□□□ -0.6
VAMP1-206ENST00000538970 IL33O95760 270 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 IFI6P09912 130 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 CD79BP40259 229 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 KIR2DL2P43627 348 aaPredicted RBP11.28□□□□□ -0.6
VAMP1-206ENST00000538970 SUCLG1P53597 346 aaKnown RBP11.28□□□□□ -0.6
VAMP1-206ENST00000538970 TPD52P55327 224 aaPredicted RBP11.28□□□□□ -0.6
VAMP1-206ENST00000538970 EEFSECP57772 596 aaKnown RBP11.28□□□□□ -0.6
VAMP1-206ENST00000538970 FAM27E3Q08E93 113 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 DECR1Q16698 335 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 IMPG1Q17R60 797 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 ZNF474Q6S9Z5 364 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms